| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3060669 = | 429 (0.910) | 15 (0.040) | 8/92 | NT | 5.0% | intergenic (‑137/+30) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein |
| ? | CP009273 | 3060693 = | 212 (0.550) | intergenic (‑161/+6) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein | |||||
Only 100 of 157 total aligned reads displayed.
TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3060745‑3060669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA > CP009273/3060693‑3060759 TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTC < 1:18034566/68‑1 atAACCTGTGGTTCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:16919793/66‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG > 1:32928253/1‑68 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG > 1:30470495/1‑68 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:16036414/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGACCGACGTATTCG > 1:11762059/1‑68 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATACTTGTAGCCCGACGTATTCG > 1:33012773/1‑68 GAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG > 1:33351210/1‑67 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:27077550/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:9805586/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:7388320/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:6124182/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:38815026/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:3011846/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:27647505/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:23879293/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:13729060/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:13428080/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:11072955/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTC < 1:21635821/67‑1 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:34363443/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:38982651/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:6438900/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:32341595/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:32257450/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:12616146/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:30123220/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:29289303/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG < 1:4389932/68‑1 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:24235984/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:23660923/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:22933991/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:22602695/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:5601149/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:17755508/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCCTCGG > 1:20231681/1‑68 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:33434178/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:6719942/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:13445544/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:37317654/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:29920109/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:13490435/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:29280649/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:13301608/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:14724904/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:14665518/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:7147098/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:23895362/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:6351665/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:10707407/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:35472165/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:11053498/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:7783541/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:1433076/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:35584628/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:14208751/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGGCGGG < 1:13042707/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAAAAATATTTGTAGCCCGACGTATTCGTCGGG < 1:22626729/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGC < 1:9090078/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGC < 1:16479070/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGC < 1:19133218/68‑1 GTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCT < 1:20065554/68‑1 TGGATCAACAACCCGCTAAAACACCTGCAGCACAATATTATTTGTAGCCCGACGTATTCGTCGGGCTA > 1:30816188/1‑68 TCAACAACCCGCTAAAACACCTGCACCAAAATAATAAATGTAGCCCGACGTATTCGTCGGGCTACAA < 1:33720287/67‑1 AAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGC < 1:1206528/68‑1 ACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGT < 1:36726306/68‑1 ACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGT < 1:19210650/68‑1 TATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTT < 1:38236569/68‑1 CCGACGTATTCGGCGGGCTACAAAAATAATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGG < 1:29625664/68‑1 CGACGTATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGT < 1:5696730/68‑1 GACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTT < 1:37337569/68‑1 CGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGG > 1:30880964/1‑68 CGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGG < 1:2470865/68‑1 CGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGG > 1:1835074/1‑68 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGA < 1:37596476/68‑1 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGA < 1:21791156/68‑1 TCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAA > 1:27630856/1‑68 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:30479732/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:29636887/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:25650514/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:18505602/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:18639854/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:22187257/68‑1 GGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGA < 1:8706146/68‑1 GGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGA < 1:10693676/68‑1 GCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACC > 1:36141501/1‑68 GCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGAC < 1:10213448/67‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:10357502/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:491082/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:37709690/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:36062331/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:34556803/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:24288749/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:13369238/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:23231099/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:16612495/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:13772976/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGGTGATCCACAGGTTCTAACTGGAAGACCAC < 1:16934631/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGGTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:11442952/68‑1 ACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA < 1:31611885/68‑1 TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3060745‑3060669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA > CP009273/3060693‑3060759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |