| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3060669 = | 429 (0.910) | 15 (0.040) | 8/92 | NT | 5.0% | intergenic (‑137/+30) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein |
| ? | CP009273 | 3060693 = | 212 (0.550) | intergenic (‑161/+6) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein | |||||
Only 100 of 528 total aligned reads displayed.
ACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA > CP009273/3060626‑3060759 | acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc < 1:17010958/68‑1 (MQ=255)acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc < 1:20700106/68‑1 (MQ=255)acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc < 1:15321840/68‑1 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:17260743/1‑68 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:36575557/1‑68 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:13912039/1‑68 (MQ=255) aacaacccgctaaaacacctgcagcacaataatatttgTAGCCCGACGAATACGTCGGGCTACAAata < 1:38236569‑M1/30‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:7516053/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:23081711/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:37214453/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:13646985/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:34098873/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:33177048/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:20985608/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:31678300/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:27661584/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:13216350/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:5213951/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:23536248/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:11890982/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:7870809/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:23800286/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:25029229/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGGAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:5982525/67‑1 (MQ=255) attacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtatt < 1:2338719/68‑1 (MQ=255) attacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtatt < 1:29026895/68‑1 (MQ=255) attacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtatt < 1:18100815/68‑1 (MQ=255) attacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtatt < 1:1039262/68‑1 (MQ=255) agaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgt > 1:5392259/1‑68 (MQ=255) agaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgt > 1:28485/1‑68 (MQ=255) agaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAAGACGTCGGGCTACAAATATTATtgt > 1:36027890/1‑68 (MQ=255) aaaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgt > 1:26675024/1‑66 (MQ=255) aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgtg < 1:33757610/66‑1 (MQ=255) aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgtg < 1:33005468/66‑1 (MQ=255) aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgct < 1:2029630/68‑1 (MQ=255) aaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgctgc < 1:21635151/68‑1 (MQ=255) aaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgctgc < 1:4094885/68‑1 (MQ=255) aggaggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCa > 1:27551610/1‑68 (MQ=255) acctgcagcacaataatatttgTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:36726306‑M1/46‑1 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:16681455/67‑1 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:34462205/67‑1 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:25390575/67‑1 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:18686196/67‑1 (MQ=255) gCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgtgt > 1:21969694/1‑68 (MQ=255) tCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGc > 1:18316844/1‑68 (MQ=255) gTAAAGGCTTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCggg < 1:30594788/67‑1 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCggg < 1:25991279/67‑1 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCggg < 1:14298667/67‑1 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgt > 1:19434358/1‑68 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgt > 1:26135565/1‑68 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgt > 1:16138416/1‑68 (MQ=255) aaaGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgttg > 1:8345043/1‑68 (MQ=255) aaaGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgtt < 1:9776335/67‑1 (MQ=255) aGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgttgtt < 1:37455833/68‑1 (MQ=255) aGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgttgtt < 1:35618523/68‑1 (MQ=255) ggCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGttgttg > 1:9499105/1‑68 (MQ=255) ggCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGttgttg > 1:5639070/1‑68 (MQ=255) ggCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGttgttg > 1:12156128/1‑68 (MQ=255) ggCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGttgttg > 1:15821213/1‑68 (MQ=255) ggCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGttgttg > 1:17745388/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa > 1:28155955/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa > 1:640329/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTGTAGCGGGTTGTTGa > 1:10300011/1‑68 (MQ=255) cATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa < 1:6275373/67‑1 (MQ=255) aTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGAt < 1:38690692/67‑1 (MQ=255) aTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGAt < 1:9326732/67‑1 (MQ=255) aTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATc < 1:38974076/68‑1 (MQ=255) ttAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATcc > 1:16477908/1‑68 (MQ=255) GCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCcaca < 1:19133218‑M1/68‑1 (MQ=255) CCCGCCGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAg < 1:13042707‑M1/68‑1 (MQ=255) CCCGACGAATACGTCGGGCTACAAATATTTTTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAg < 1:22626729‑M1/68‑1 (MQ=255) CCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAg < 1:35472165‑M1/68‑1 (MQ=255) CCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAg < 1:30193403‑M1/68‑1 (MQ=255) CCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAg < 1:13490435‑M1/68‑1 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:34749407‑M1/1‑68 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:29289303‑M1/1‑68 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:12616146‑M1/1‑68 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg < 1:4389932‑M1/68‑1 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:32257450‑M1/1‑68 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:31023172‑M1/1‑68 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:1124063‑M1/1‑68 (MQ=255) CCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg > 1:1097078‑M1/1‑68 (MQ=255) CGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGt > 1:27077550‑M1/1‑68 (MQ=255) CGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGt > 1:33640493‑M1/1‑68 (MQ=255) CGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGAGTTTTAGCGGGTTGTTGATCCACAGGTTCt < 1:14542475‑M1/68‑1 (MQ=255) aTACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTaa < 1:24631412/67‑1 (MQ=255) tACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACt < 1:19992387/68‑1 (MQ=255) aCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTg > 1:10031571/1‑68 (MQ=255) aCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTg > 1:24187526/1‑68 (MQ=255) aCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTg > 1:32714059/1‑68 (MQ=255) gtcgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGa > 1:7201879‑M2/10‑68 (MQ=255) cgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAg < 1:29636887‑M2/61‑1 (MQ=255) cgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAg < 1:25650514‑M2/61‑1 (MQ=255) cgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAg < 1:18505602‑M2/61‑1 (MQ=255) cgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAg < 1:22187257‑M2/61‑1 (MQ=255) gggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGa < 1:10693676‑M2/62‑1 (MQ=255) taCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcac < 1:13369238‑M2/66‑1 (MQ=255) taCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcac < 1:37709690‑M2/66‑1 (MQ=255) taCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcac < 1:67095‑M2/66‑1 (MQ=255) taCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcac < 1:29950224‑M2/66‑1 (MQ=255) | ACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA > CP009273/3060626‑3060759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |