| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3202572 | 315 (0.670) | 27 (0.070) | 9/92 | NT | 10.7% | coding (1190/1464 nt) | ttdT | L‑tartrate/succinate antiporte |
| ? | CP009273 | = 3202615 | 194 (0.500) | coding (1233/1464 nt) | ttdT | L‑tartrate/succinate antiporte | |||||
CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202498‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG < CP009273/3202615‑3202550 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:4315470/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:27093899/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:29561036/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:27048931/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:31836981/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:33486381/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:35006348/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:4728777/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:35058102/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:35223141/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:37771998/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:36174038/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG < 1:4474127/67‑1 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:16013858/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:19199533/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:6910486/1‑67 GGTTATACGCCAACGATGGTGATGGTGGCGTTGATTGAGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:10492865/1‑67 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:31473872/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:29540578/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC > 1:38152316/1‑68 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:13465494/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGAGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:1659572/68‑1 TTCGCCAACGATGGTGATGGTTGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTGGCCAGCG < 1:3841657/68‑1 TTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCG < 1:22023494/68‑1 TTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC > 1:5298792/1‑67 TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC < 1:25609055/68‑1 TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC < 1:6557859/68‑1 TCGCCAACGATGGTGATGGTGGCGTGGATTGTGGTGTTGTATCTACTGCGCTACTTTTTCGCCAGCt > 1:1328798/1‑66 TCGCCAACGATGGCGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCG > 1:22363661/1‑67 CAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGC < 1:15139500/67‑1 GTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGA < 1:4082939/68‑1 GTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGA < 1:31727803/68‑1 GGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGG < 1:17581301/68‑1 GGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAG < 1:719438/67‑1 TGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGT < 1:38804015/67‑1 ATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCC < 1:6638569/68‑1 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:189396/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:28137605/1‑68 ACTGCGCTACTTTTTCGCCAGCGCCGCAGCAATCATCATCGGTGCGAGAGGGGTGGTATACGCCGTG > 1:7354575/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCTGCAATCATCATCGGTGCGAGCGCGGTGGTATACGCCGTG > 1:15719118/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCATTCATCATCGGTGCGAGAGCGGTGGTATACGCCGTG > 1:4188286/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAGTCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:3753019/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCCTCATCGGTGCGAGCGCGGAGGTATACGCCGTG > 1:2803533/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATTCGCCGTG > 1:14407597/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:12749889/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:3562185/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:9524095/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:16386142/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:33804295/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:29762898/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:27321124/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:19387443/1‑67 GCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGGGGGCGGGGAGGTATACGCCGTGGC > 1:2171078/1‑66 GCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGC > 1:7576797/1‑66 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATCCGCCGTGGCGCTG > 1:10694168/1‑68 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTG > 1:3860822/1‑68 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTG > 1:5106912/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:16672427/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:26724441/1‑68 TTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAA > 1:33499659/1‑68 CGCCCGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:5095264/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:9809578/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:33121391/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:28719730/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:26773631/1‑68 GCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:24482354/1‑68 GCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCT‑GCGAAAAAGTA > 1:842486/1‑67 CCAGCGCTGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:36937011/1‑67 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:30126519/1‑67 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:624996/1‑67 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGC < 1:1088126/68‑1 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGC < 1:1437333/68‑1 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGC < 1:9984184/68‑1 CGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCA > 1:601940/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:24081366/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:15348114/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:680607/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:17307984/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:33898699/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:35326242/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCA < 1:20022018/67‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:13113858/66‑1 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202498‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG < CP009273/3202615‑3202550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |