| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 297 (0.630) | 29 (0.070) | 10/96 | NT | 10.2% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 257 (0.640) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 129 total aligned reads displayed.
CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215274‑3215338 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:10126730/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:13346412/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:14115781/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:14438896/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:21083622/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:25652659/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:12532737/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:30886987/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:35605495/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:3691964/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:3859152/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:39077359/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:8483640/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGGCGATAAAACAGATATTGTCGGTCAACGCGCTG < 1:6473647/68‑1CCACCGCATCGTAACCGCTGCCGGGTTAGTGAAAGTCGTTAAAAAAGATATTGTCGGTCAACGCGCTG > 1:33389598/1‑68 CACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:30294563/1‑67 CACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:2608148/1‑67 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:25806860/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:7482654/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:23245876/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:7383086/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:29983274/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC < 1:11819994/68‑1 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC < 1:17095150/68‑1 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:21101524/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:11003876/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAAAGCGCTGGC > 1:15601322/1‑68 ACCGCATCGTAACCGATGCCGGGTGCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC < 1:24720152/68‑1 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:18908144/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:19397058/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:38059482/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:19767256/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC > 1:19209974/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC > 1:4349459/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:6938096/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC > 1:14633456/1‑68 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:10728867/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:34903520/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:10009301/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:25991144/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:25293467/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:9784005/1‑67 ATCGTAACCGCTGCCGGGTTAGTGAAAGTCGAGGAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:8728070/1‑67 ATCGTAACCGCAGCCGCGTTCGGGAAAGGCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:13341115/67‑1 cCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:11861418/67‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:18048104/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:38708832/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:28898123/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGGCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:9259007/68‑1 CGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTT < 1:29915093/68‑1 GTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:23377671/66‑1 CCGCTGCCGGGTTCGTGAAAGTCGATAAACCAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:38685398/68‑1 CCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:26181378/68‑1 CCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:34288952/68‑1 gGCCGGGGTCGTGAAAGTCGATAAAACAGATCTTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:27507580/67‑1 TGCCGGGTTCGTGAAAGTCGCTAAACCAGATCTTGCCGGTCACCGCCCTGGCAGCGGTTACGATGCGG < 1:15913836/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:23336186/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCGGGCAGCGGTTACGATGCGG < 1:25365613/68‑1 GCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:22213188/68‑1 GCCGGGTTCGTGAAAGTCGATAAAACAGACATTGTCGGTCAACGCGCGGGCAGCGGTTACGATGCGGT < 1:80524/68‑1 GCCGGGAGCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:32721446/68‑1 CCGGGTTCGTGAACGTCGATAAAACCGATATTGTCGGCCACCGCGCTGGCAGCGGTTACGATGCGGT < 1:23902201/67‑1 CCGGCTTCGTGAAAGTCGATAAAACAGATCGTGGCGGTCAACCCGCTGGCAGCGGTTACGATGCGGTG < 1:33244366/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:12253470/68‑1 gcTCGTGAAAGGCGATAAAACAGAAATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:8210734/65‑1 GTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:26939199/67‑1 GTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:22257772/67‑1 GTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:11757075/67‑1 GTTCGTGAAAGTCGATAAAACAGAAATTGCCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:16855407/67‑1 gCGTGAAAGTCGATAAAACAGATATTGGCGGTCAACGCGCGGGCAGCGGTTACGATGCGGTGGATATC < 1:14946414/67‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:6505228/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:7010143/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:34993104/68‑1 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:28839710/1‑68 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:38279419/1‑68 CAGCGGTTACGATGGGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTAT < 1:23834222/64‑1 cGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:37428921/67‑1 AGCTGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:12347399/67‑1 AGCGGTTACGCTGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:12557235/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:1311289/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:13497751/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:10687851/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:14454557/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:27931415/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:6606584/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:4340419/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:10993481/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:38936614/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:34672716/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:20839037/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:35645461/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATAATCGACTTCTATATCA > 1:13330337/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:22866556/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:27090801/1‑67 GGTTACGATGCGGTTGATATCGATCTGGCAGGCATCATTAAAGAAATCATCGACTTCTATATCAA < 1:31659037/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC < 1:4556255/67‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:30069021/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:32015454/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:26957265/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:2356076/65‑1 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215274‑3215338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |