| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 297 (0.630) | 29 (0.070) | 10/96 | NT | 10.2% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 257 (0.640) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 411 total aligned reads displayed.
GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGA > CP009273/3215146‑3215279 | ttACCAGACATTAAAAACGTCACCGTTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgccg < 1:11121025/67‑1 (MQ=255) ttACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgccgc < 1:3504/68‑1 (MQ=255) ttACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:12998253/1‑66 (MQ=255) gttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:30069021‑M1/2‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:14454557‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:10926201‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:7532940‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:6902647‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:12366846‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:27931415‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:38936614‑M1/5‑1 (MQ=255) aCCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt > 1:19519670/1‑67 (MQ=255) atatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGcc < 1:6505228‑M1/8‑1 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:35596134/1‑68 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:9215039/1‑68 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:22038076/1‑68 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:19037160/1‑68 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcg < 1:30956177/68‑1 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGACCGCCCTGCGCGCCGCTGCCAgc > 1:26281526/1‑67 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTgcgcgc < 1:11266589/56‑1 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcgc < 1:30656680/68‑1 (MQ=255) ttAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGcgcg < 1:5227126/68‑1 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:14876211/68‑1 (MQ=255) aaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:20917741/1‑68 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:32801429/68‑1 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa > 1:3214494/1‑67 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa > 1:28374481/1‑67 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa > 1:23875745/1‑67 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGACAGCGCGTTGa > 1:7823474/1‑67 (MQ=255) aCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGAcc > 1:26913872/1‑68 (MQ=255) aCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGAcc < 1:12791665/68‑1 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg < 1:10662092/68‑1 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:27096699/1‑68 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:3966485/1‑68 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:2607333/1‑68 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:34586594/1‑68 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:24827915/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:1529765/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:16659598/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:36210466/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:2257482/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGAc < 1:29456262/67‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGAc < 1:10006367/67‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:38116386/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:31809988/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:23694952/68‑1 (MQ=255) aCCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACaa < 1:19749586/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:13681029/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:11700589/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:39019535/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:338506/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:23949231/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:37073355/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:7063724/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:35889003/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:10391543/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:31590825/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:29795842/68‑1 (MQ=255) actgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGCCAGCGCGTTGACCGACAata < 1:25097821‑M1/27‑1 (MQ=255) aTTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCt < 1:20314588/67‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:5725433/68‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:12509770/68‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:434211/68‑1 (MQ=255) ttttAAATGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:25738926/68‑1 (MQ=255) aaTTGTCGGCAAACCCCCGCCCGCCCTGCGCGCCGCTGCCAGCGCGGTGACCGACCTTATCTGTTTTa > 1:34945738/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:23000445/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:38460174/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCGGTTTTa > 1:15920966/1‑68 (MQ=255) aTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAt < 1:1198657/68‑1 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATc > 1:14097351/1‑67 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATGTGTTTTAtgg > 1:7264067/1‑66 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCg > 1:3438464/1‑68 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCg > 1:17496144/1‑68 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCg > 1:6041255/1‑68 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:13371609/67‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:8457394/67‑1 (MQ=255) aaaCCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTc < 1:33256085/67‑1 (MQ=255) aaaCCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTc < 1:16803456/67‑1 (MQ=255) aaaCCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTc < 1:15493992/67‑1 (MQ=255) ccACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGaa < 1:1182477/68‑1 (MQ=255) cACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAAc < 1:6251046/68‑1 (MQ=255) cccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGACCCCg > 1:16477037/1‑67 (MQ=255) cccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCg > 1:17826130/1‑67 (MQ=255) ccgcccTGCGCGCCGCTGCCAGCGCGGTGACCGCCAATATCTGTTTTATCGACTTTCAGGAACCCgg > 1:21285176/1‑67 (MQ=255) ccgcatcgtaaCCGCTGCCCGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCa < 1:25365613‑M1/57‑1 (MQ=255) gcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAg < 1:8113235/68‑1 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:28036182/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:1720967/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:36704083/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:29215707/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:18357376/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:18623886/1‑68 (MQ=255) acTGCGCGCCGCTGCCAGCGCGGTGACGGACAATATCTGTTTTATAGACTTTCACGCACCCGGCAgac > 1:37588166/2‑66 (MQ=255) cTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCgg < 1:13251293/68‑1 (MQ=255) gcgcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGtt < 1:4767788/68‑1 (MQ=255) cgcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGtt > 1:24542829/1‑67 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:5460714/1‑68 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc < 1:23377671‑M1/65‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:28898123‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:38708832‑M1/67‑1 (MQ=255) | GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGA > CP009273/3215146‑3215279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |