| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4306574 = | 188 (0.400) | 13 (0.030) | 11/98 | NT | 7.9% | coding (462/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | CP009273 | 4306632 = | 137 (0.330) | coding (404/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
Only 100 of 333 total aligned reads displayed.
CTCGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGAC > CP009273/4306508‑4306641 | ctcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc < 1:25417456/68‑1 (MQ=255) tcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc > 1:23227000/1‑67 (MQ=255) tcGCGGTGGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgcg < 1:13043117/68‑1 (MQ=255) atgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc < 1:29619577‑M1/2‑1 (MQ=255) atgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc < 1:3811851‑M1/2‑1 (MQ=255) acgaagaagagcaactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc > 1:29288738‑M2/23‑67 (MQ=255) tgatcaacgccatcgaagagccgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc < 1:27938769‑M1/2‑1 (MQ=255) tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgcgc > 1:38975373‑M1/65‑68 (MQ=255) tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgcg > 1:27707435‑M1/65‑67 (MQ=255) tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgaatctgcgc > 1:3213084‑M1/65‑68 (MQ=255) gcgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt < 1:5170826/68‑1 (MQ=255) gcgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt < 1:29009729/68‑1 (MQ=255) cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACTCCAGCGTCACCGGCTCGCGCt > 1:2989897/1‑67 (MQ=255) cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt > 1:4702231/1‑67 (MQ=255) cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt > 1:37627758/1‑67 (MQ=255) cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt > 1:8382349/1‑67 (MQ=255) cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt > 1:17464414/1‑67 (MQ=255) cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt > 1:21128972/1‑67 (MQ=255) atcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCt < 1:24808421‑M1/5‑1 (MQ=255) atcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCt < 1:11803977‑M1/5‑1 (MQ=255) tcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGc < 1:35723667‑M1/7‑1 (MQ=255) tcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGc > 1:3102698‑M1/62‑68 (MQ=255) ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc > 1:7618966/1‑68 (MQ=255) ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc < 1:26388165/68‑1 (MQ=255) ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc > 1:11311489/1‑68 (MQ=255) ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc < 1:18406699/68‑1 (MQ=255) gAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGt < 1:35854576/67‑1 (MQ=255) aactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt > 1:27227093‑M2/11‑68 (MQ=255) aactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt > 1:107121‑M2/11‑68 (MQ=255) aactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt > 1:21673798‑M2/11‑68 (MQ=255) aactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt > 1:22353066‑M2/11‑68 (MQ=255) actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt < 1:1953936‑M2/58‑1 (MQ=255) actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt < 1:8201957‑M2/58‑1 (MQ=255) actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt < 1:14832061‑M2/58‑1 (MQ=255) tggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTc > 1:13470128‑M2/8‑68 (MQ=255) tGGCCCGGCGAGTGGTCCATCAGCGCCACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACa < 1:37025932‑M2/66‑1 (MQ=255) ggCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGc < 1:26837163/68‑1 (MQ=255) cccGGCGAGTGGTCCATCAGCGCCACCAGCGTCACCGGCTCGCGCTGCACCAGGTTTTCAAACAGCg > 1:8413685/1‑67 (MQ=255) cccGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCg > 1:20763183/1‑67 (MQ=255) ggCGAGTGGTCCATCAGCGCCACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACCGCGGCa > 1:29856825/1‑67 (MQ=255) cGAGTGGTCCATCAGCGACACCAGAGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCg > 1:21330255/1‑68 (MQ=255) gAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgt < 1:31343796/68‑1 (MQ=255) aGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtg > 1:31674022/1‑68 (MQ=255) gTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtgg > 1:8364109/1‑68 (MQ=255) ggTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtggtg > 1:17690698/1‑68 (MQ=255) ggTCCATCAGCGACACCAGCGACCCAGCCTCCCGCTGCACCAGGATTTCAAACCGCGGCAGCgtggtg > 1:12485459/1‑68 (MQ=255) gTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGGGgtgt > 1:27832380/1‑68 (MQ=255) aTCAGCGACACCAGCGTCACCGGCACGCGCTGCACCACGGTTTCAAACAGCAGCAGCGTGGGGGGAt > 1:9504642/1‑67 (MQ=255) agtgACACCAGCGTCCCCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:6290794/4‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:26767060/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:8857361/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:10548766/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:532418/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:14394887/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:1464803/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:16059880/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:36721581/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:1691120/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:18108709/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:35192310/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:34953728/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:34463506/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:34199587/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:32330389/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:19665971/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:27470208/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:24528878/1‑67 (MQ=255) aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg > 1:32641964/1‑67 (MQ=255) cGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCa > 1:3819828/1‑68 (MQ=255) gACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAg > 1:28016677/1‑68 (MQ=255) gACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAg > 1:16305763/1‑68 (MQ=255) cacCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGtt < 1:7091182/68‑1 (MQ=255) acCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc > 1:35454237/1‑68 (MQ=255) ccAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc > 1:2876129/1‑67 (MQ=255) ccAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc > 1:19339234/1‑67 (MQ=255) ccAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc > 1:25089015/1‑67 (MQ=255) ccAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc > 1:8020352/1‑67 (MQ=255) ccAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc > 1:25768891/1‑67 (MQ=255) accgtctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGGGGGGTGATGCGGCAGTTcgca < 1:24092018‑M1/54‑1 (MQ=255) ccgtctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc > 1:4588916‑M1/13‑68 (MQ=255) cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc > 1:5826044/1‑68 (MQ=255) cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc > 1:13266100/1‑68 (MQ=255) gTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc < 1:15266258/67‑1 (MQ=255) gTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc > 1:6877731/1‑67 (MQ=255) gTCACCGGCTCGCGCTGCACCAGGTTTTCACACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc < 1:38691977/67‑1 (MQ=255) aCCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagcgcag > 1:16460043/1‑68 (MQ=255) ccGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGa > 1:21953988/1‑68 (MQ=255) ccGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGa < 1:13756398/68‑1 (MQ=255) cGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:14145325/1‑68 (MQ=255) cGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:18606476/1‑68 (MQ=255) ggCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:1000426/1‑67 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:4106800‑M1/65‑1 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:36349054‑M1/65‑1 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:12055899‑M1/65‑1 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:9297387/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:3954995/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:33007334/1‑68 (MQ=255) tCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGCGTGATGCGGCAGTTCGCAGCGCAGATGCAg > 1:33497667/1‑68 (MQ=255) cgcgCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAg > 1:23661287/1‑67 (MQ=255) GCGCTGCACCAGTTTTTCAAACAGCTGCAGCGTGGGGTGATGCGGCAGTGCGCAGCGCAGATGCAGAc > 1:23460843‑M1/1‑68 (MQ=255) | CTCGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGAC > CP009273/4306508‑4306641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |