| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 142767 = | 442 (0.940) | 19 (0.050) | 10/94 | NT | 5.5% | coding (1200/1230 nt) | yadE | putative polysaccharide deacetylase lipoprotein |
| ? | CP009273 | 142790 = | 284 (0.720) | coding (1223/1230 nt) | yadE | putative polysaccharide deacetylase lipoprotein | |||||
Only 100 of 590 total aligned reads displayed.
GGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTAC > CP009273/142703‑142835 | gggATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTcgcg < 1:30735653/67‑1 (MQ=255)gggATAATCCGTTGGTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTcgcg < 1:14356154/67‑1 (MQ=255) cgacaatgaaatgaaacgtaccgcgaaagcgattccggtacaggttgcttgattgttatccctGCg < 1:3952731‑M1/3‑1 (MQ=255) gactatgaaatgaaacgtaccgcgaaagcgattccggtacaggttgcttgattgttatccctGCGGc > 1:12724150‑M1/63‑67 (MQ=255) gacaatgaaatgaaacgtaccgcgaaagcgattccggtacaggttgcttgattgttatccctGCGGc > 1:27923720‑M1/63‑67 (MQ=255) gATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGc < 1:25076284/67‑1 (MQ=255) gATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGc < 1:3533350/67‑1 (MQ=255) gATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGc < 1:716042/67‑1 (MQ=255) gATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGc < 1:23387620/67‑1 (MQ=255) gATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGc < 1:32431127/67‑1 (MQ=255) gATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGc < 1:21152221/67‑1 (MQ=255) aTAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTg > 1:2564722/1‑68 (MQ=255) tAAACCGTTGTTACTAAAACGACGTTATATCTTAAGAACTGATTCGCTGGCGACGATGTCGCGGCTgg < 1:1494775/68‑1 (MQ=255) caatgaaatgaaacgtaccgcgaaagcgattccggtacaggttgcttgattgttatccctGCGGCTgg > 1:33672390‑M1/61‑68 (MQ=255) caatgaaatgaaacgtaccgcgaaagcgattccggtacaggttgcttgattgttatccctGCGGCTg > 1:4729170‑M1/61‑67 (MQ=255) aaTCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGt < 1:8020611/68‑1 (MQ=255) aaTCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGt < 1:34898913/68‑1 (MQ=255) tCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGa > 1:8583245/1‑68 (MQ=255) ccGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAg > 1:10038437/1‑68 (MQ=255) ccGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAg > 1:31983386/1‑68 (MQ=255) ccGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAg > 1:21873126/1‑68 (MQ=255) ccGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAg > 1:36673599/1‑68 (MQ=255) ccGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAg > 1:13315907/1‑68 (MQ=255) tgttACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTaa > 1:10623841/1‑67 (MQ=255) tgttACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTaa > 1:22545331/1‑67 (MQ=255) gttACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGGCGCGGCTGGTGAGTAAcc < 1:34305523/68‑1 (MQ=255) tACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCa > 1:35544957/1‑67 (MQ=255) cTAAAACGACTTTATATCTTAAGTACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGcc < 1:15286256/68‑1 (MQ=255) cTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGcc < 1:35129564/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg > 1:22216115/1‑68 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg > 1:19684619/1‑68 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg > 1:38911443/1‑68 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:20600979/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAATAACCAGCCGCAgg < 1:25370088/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg > 1:15649073/1‑68 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:29816552/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:17786605/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:18425256/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAATCAGCCGCAGGGa < 1:31004127/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:5785719/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:6485102/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:10158292/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:20217776/68‑1 (MQ=255) gACTTTATAACTAAAGAACGGAAGCGCTGGAGACGATGTCGCGGCGGGTGAGTAACCAGCCGCAGGGa < 1:21608342/68‑1 (MQ=255) cTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATa < 1:17208921/68‑1 (MQ=255) ttATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAAc < 1:5213050/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:23087703/68‑1 (MQ=255) tatCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAAt < 1:37735105/68‑1 (MQ=255) tatCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAAt < 1:26072417/68‑1 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:13678192/1‑68 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:24393375/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:13988235/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa < 1:1909911/68‑1 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:32907556/1‑68 (MQ=255) ccggtacaggttgcttgattgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCaa < 1:11748885‑M1/38‑1 (MQ=255) tacaggttgcttgattgttatccctGCGGCTGGGGGGTAACCAGCCGCCGGGGTTACAATCAAGCaa < 1:11148698‑M1/42‑1 (MQ=255) gAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:23574043/1‑67 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:3610678/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:16109764/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:24859083/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:19898346/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:11955531/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:7007442/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:28312615/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAcc < 1:19462927/67‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:32686655/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:33497729/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:4103205/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:15500129/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGGCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAcc < 1:17513980/67‑1 (MQ=255) ggttgcttgattgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:25884445‑M1/47‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:31312578/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:5512192/68‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:37192117/67‑1 (MQ=255) ttCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTAcc > 1:28546349/1‑68 (MQ=255) ttCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTAcc > 1:18885169/1‑68 (MQ=255) cGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCgg < 1:9349075/68‑1 (MQ=255) cGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCgg < 1:9701068/68‑1 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:2390684/1‑67 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCCCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:4216177/1‑67 (MQ=255) ggAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATc > 1:18065774/1‑68 (MQ=255) tgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATc < 1:37638088‑M1/56‑1 (MQ=255) gaCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCt > 1:8947114/1‑68 (MQ=255) gaCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCt > 1:1131530/1‑68 (MQ=255) gaCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCt > 1:31658490/1‑68 (MQ=255) aCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCtt > 1:36963492/1‑68 (MQ=255) aCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCtt > 1:16452830/1‑68 (MQ=255) gATGTGGCGGCTGGTGAGGAAGCAGCCGCAGGTATAACAATCATGGAAGCTGTAGCGGAATCGCTTTc < 1:30127303/68‑1 (MQ=255) atccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:24499063‑M1/62‑1 (MQ=255) tccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:2873606‑M1/62‑1 (MQ=255) tccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:27293892‑M1/62‑1 (MQ=255) tccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:7770142‑M1/62‑1 (MQ=255) tccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:38003433‑M1/62‑1 (MQ=255) aTGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc > 1:29010069/1‑67 (MQ=255) aTGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc > 1:38623144/1‑67 (MQ=255) tGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTcg < 1:34479668/67‑1 (MQ=255) ccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTcgc < 1:267923‑M1/64‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:6062844/68‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:38227826/68‑1 (MQ=255) GCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTT‑CGCGGTAc > 1:16864367‑M1/1‑68 (MQ=255) | GGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTAC > CP009273/142703‑142835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |