| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 142767 = | 442 (0.940) | 19 (0.050) | 10/94 | NT | 5.5% | coding (1200/1230 nt) | yadE | putative polysaccharide deacetylase lipoprotein |
| ? | CP009273 | 142790 = | 284 (0.720) | coding (1223/1230 nt) | yadE | putative polysaccharide deacetylase lipoprotein | |||||
Only 100 of 567 total aligned reads displayed.
AAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCTTC > CP009273/142723‑142857 | aaaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCa > 1:15538484/1‑68 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:3807478/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:204935/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:17853270/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:8280415/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:37796634/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:258131/68‑1 (MQ=255) gcgaaagcgattccggtacaggttgcttgattgttatccctgcggctggttactcaccagccgcAggg < 1:13995141‑M2/4‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg > 1:10075946/1‑68 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:390176/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:29816552/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:28465620/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGGGAGTAACCAGCCGCAggg < 1:347399/68‑1 (MQ=255) gACTTTATATCTTAAGACCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:1056520/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:26404102/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:36706129/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:25373995/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:24007150/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:5785719/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:21096261/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa > 1:18972647/1‑68 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:14458808/68‑1 (MQ=255) gACTTTATATCATAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:9413601/68‑1 (MQ=255) gACTTTATAACTAAAGAACGGAAGCGCTGGAGACGATGTCGCGGCGGGTGAGTAACCAGCCGCAGGGa < 1:21608342/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:37049768/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:24595281/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:23087703/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:398337/68‑1 (MQ=255) tatCTTAAGAACGGATTCGCTGGAGACTATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAAt < 1:4156648/68‑1 (MQ=255) tatCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAAt < 1:30753174/68‑1 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACaa > 1:18734751/1‑66 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc < 1:35835956/68‑1 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:37674866/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:4771748/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:26062825/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:38308267/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:30922998/1‑68 (MQ=255) tccggtacaggttgcttgattgttatccctgcggctggttactcaccagccgcAGGGATAACAATCaa < 1:16840719‑M2/15‑1 (MQ=255) aGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa < 1:22369591/68‑1 (MQ=255) tacaggttgcttgattgttatccctgcggcgggttacgcaccagccgcAGGGATAACAATCAAGCaa < 1:15330210‑M2/19‑1 (MQ=255) tacaggttgcttgattgttatccctGCGGCTGGGGGGTAACCAGCCGCCGGGGTTACAATCAAGCaa < 1:11148698‑M1/42‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:12770562/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:30034943/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:16109764/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:7007442/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:38716444/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:27002708/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:32291106/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:23664505/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:25277018/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCt < 1:24935262/68‑1 (MQ=255) aggttgcttgattgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa < 1:8833930‑M1/42‑1 (MQ=255) ggttgcttgattgttatccctGCGGGTGGTGCGTATCCAGCCGGAGGGATAACCATCAAGCAGCCTGt < 1:32585514‑M1/47‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:13836383/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:35519338/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:34415561/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt > 1:19733026/1‑68 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:18397350/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:31312578/68‑1 (MQ=255) ttgcttgattgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAAACAAGCAACCTGTa < 1:15688741‑M1/48‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:17024540/67‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:15109745/67‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:11901866/67‑1 (MQ=255) cGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCgg < 1:5648751/68‑1 (MQ=255) gCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGa > 1:33740783/1‑68 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:4259217/1‑67 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:1122513/1‑67 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:2344679/1‑67 (MQ=255) tgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATc < 1:9750150‑M1/56‑1 (MQ=255) gaCGATGTCGCGGCTGGTGAGTAACCAGCCGCTGGGATAACATTAACGCAACCTGTCCCGCAATCggt > 1:5393126/1‑66 (MQ=255) aCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCtt > 1:35296036/1‑68 (MQ=255) tccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:19545367‑M1/62‑1 (MQ=255) tGTCGCGGCTGGTTAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTcg < 1:31936704/67‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:31544/68‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:28887321/68‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:32816731/68‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:20169418/68‑1 (MQ=255) GGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCTGTAc > 1:27968196‑M1/1‑67 (MQ=255) gcgggTGAGTAACCACCCGCAGGGATAACAATCAAGCAACCAGGACCGGCATCGCTTTCGCGGGACGt > 1:900779/4‑68 (MQ=255) CTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtt < 1:7788575‑M1/68‑1 (MQ=255) CTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtt > 1:6480500‑M1/1‑68 (MQ=255) CTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGt > 1:18060499‑M1/1‑67 (MQ=255) TGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtt > 1:7519608‑M1/1‑67 (MQ=255) gAGTAACCAGCGGCAGGGATAACAATCAAGCAACCTGTTCGGGAATCGCTTTCGCGGTACGtttcat < 1:19199394/67‑1 (MQ=255) gAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTATCGCGGTACGtttcat < 1:29371828/67‑1 (MQ=255) aGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtttcatt > 1:16414712/1‑67 (MQ=255) aaCCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTttcatttcat > 1:13545730/1‑68 (MQ=255) aaCCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTttcatttcat > 1:36174784/1‑68 (MQ=255) accagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTtcatttcatt > 1:22087300‑M2/10‑68 (MQ=255) accagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTtcatttcatt > 1:30259358‑M2/10‑68 (MQ=255) accagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTtcatttcatt > 1:11371896‑M2/10‑68 (MQ=255) ccagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTg > 1:1733873‑M2/9‑68 (MQ=255) cagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGt < 1:28728797‑M2/61‑1 (MQ=255) gccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTc > 1:33560478‑M2/6‑67 (MQ=255) gccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTc > 1:27413972‑M2/6‑67 (MQ=255) gccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATAGTc > 1:6092512‑M2/6‑67 (MQ=255) cgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCg > 1:12372586‑M2/4‑66 (MQ=255) cgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGcc < 1:37547371‑M2/65‑1 (MQ=255) gcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCt < 1:24408604‑M2/66‑1 (MQ=255) aGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCTTc > 1:33095633/1‑68 (MQ=255) | AAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCTTC > CP009273/142723‑142857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |