| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248303 | 160 (0.340) | 25 (0.060) | 8/96 | NT | 12.0% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | = 248351 | 231 (0.570) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 485 total aligned reads displayed.
TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTG > CP009273/248236‑248369 | tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:20332361‑M1/8‑1 (MQ=255)tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:23844902‑M1/8‑1 (MQ=255)tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:38535522‑M1/8‑1 (MQ=255)tCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:10201530‑M1/68‑1 (MQ=255) ctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc > 1:9260684‑M1/60‑67 (MQ=255) gCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGC‑AACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:28038543/68‑1 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCATCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:8629706/1‑68 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:16269630/1‑68 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:26564120/1‑68 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:34030751/1‑68 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:3344/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:13574136/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:28468124/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:12608591/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:38238059/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:11466121/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:1005740/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:19113151/67‑1 (MQ=255) aGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAAt > 1:25148152/1‑68 (MQ=255) aGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAAt > 1:9698079/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:11941737/1‑68 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:8982330/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:6049233/67‑1 (MQ=255) tgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGCTGAATaaa < 1:35862016‑M1/16‑1 (MQ=255) tGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGc < 1:37308956/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:17666256/1‑67 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGAt < 1:33213138/68‑1 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:17460510/1‑66 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCgttcatcccaggtttt > 1:7521778‑M1/1‑52 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt < 1:37736276/68‑1 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt < 1:13012044/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:29290787/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:14353272/68‑1 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:1973883/1‑68 (MQ=255) gTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:18231382/1‑67 (MQ=255) ttCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCg > 1:160369/1‑67 (MQ=255) ttCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCg > 1:24531261/1‑67 (MQ=255) ttttCAGCTAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgc < 1:18406241/68‑1 (MQ=255) tttCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgcg < 1:32546077/68‑1 (MQ=255) tttCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgcg < 1:6813491/68‑1 (MQ=255) gcagccccaccagacgcacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGt < 1:6304100‑M1/40‑1 (MQ=255) tCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTa > 1:4826239/1‑68 (MQ=255) cccaccagacgcacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCCCCGCGCgtaacc < 1:17040673‑M1/44‑3 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:10806899/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAc < 1:5349376/67‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:12177532/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:20003288/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:8054555/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:29551580/68‑1 (MQ=255) cccAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt < 1:11227792/40‑1 (MQ=255) ccAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATg > 1:31627417/1‑68 (MQ=255) cgcacaccgcgcccGCCGCGGCGGAGTAAAGCTGATCTAATCGCCACCGCGGGGAAAACCTGGGATGa < 1:24758240‑M1/54‑1 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:34182211/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:35585797/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:18017470/1‑68 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:16429212‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:31870934‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:12302462‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:21914882‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:35632371‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:8441035‑M2/67‑2 (MQ=255) gCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagcc > 1:22152163‑M1/1‑17 (MQ=255) gCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagcc > 1:35384898‑M1/1‑17 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:32108241‑M2/68‑4 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:33086098‑M2/68‑4 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgc > 1:33591484‑M2/1‑65 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:38893268‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:3100238‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:27252746‑M1/59‑1 (MQ=255) aCGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgc > 1:15035549‑M1/1‑15 (MQ=255) cGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcg > 1:9351727‑M1/1‑14 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:34698492‑M2/1‑61 (MQ=255) tCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcgg > 1:13809865‑M1/1‑12 (MQ=255) cccGCCGCGGCAGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCAGGGATGCACGCCgcggcg < 1:4227852‑M1/65‑1 (MQ=255) ggCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccag > 1:24190253‑M1/1‑9 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:2701294/68‑1 (MQ=255) GCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:13112878‑M1/68‑1 (MQ=255) ccGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccaga > 1:15359503‑M2/1‑55 (MQ=255) CGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggcg > 1:25634676‑M1/1‑67 (MQ=255) GCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGcgcg > 1:23580831‑M1/1‑68 (MQ=255) ggCTGAATACAGCTCATCTCCACGCCACCCCGCGTAAACCCGCTCATGAACGCCGCGGCGGGCGCGgt < 1:8290518/68‑1 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCgg > 1:30548537‑M1/1‑67 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:16678623‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:32885465‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:16854252‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:26097129‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:14699259‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:21352476‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:14166616‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:1941693‑M1/1‑68 (MQ=255) GGCGGAATAAAGCTGAGCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:36265754‑M1/1‑68 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:24669698‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:15565901‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:2588534‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:28189811‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggcggcgattagatcagctttattcagccgcggccagacgtgct < 1:27629157‑M1/67‑67 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:6964696‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:6374613‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:22748574‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:4436117‑M2/1‑49 (MQ=255) | TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTG > CP009273/248236‑248369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |