| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 442673 = | 443 (0.940) | 33 (0.090) | 13/90 | NT | 7.4% | coding (489/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | 442734 = | 473 (1.250) | coding (428/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 821 total aligned reads displayed.
TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGA > CP009273/442606‑442740 | tcggcgtttatagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggc < 1:18244339‑M1/1‑1 (MQ=255)tcggcgtttatagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggc < 1:28437062‑M1/1‑1 (MQ=255) aGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:27558668‑M1/1‑65 (MQ=255) aGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:15422046‑M1/1‑65 (MQ=255) aGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:33031248‑M1/1‑65 (MQ=255) aGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:30187904‑M1/1‑65 (MQ=255) aGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:10709663‑M1/1‑65 (MQ=255) gCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:23516319‑M1/1‑67 (MQ=255) gCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:22473731‑M1/1‑67 (MQ=255) cgtttatagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCt < 1:37167113‑M1/4‑1 (MQ=255) ttaaagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCTgcg > 1:2098279‑M1/61‑67 (MQ=255) aaaTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:12443257‑M1/67‑1 (MQ=255) aaaTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:8985287‑M1/67‑1 (MQ=255) tagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCTGcgccgc > 1:9693623‑M1/58‑68 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt > 1:32290499/1‑68 (MQ=255) gcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGcggcgccggga < 1:33625477‑M1/13‑4 (MQ=255) ggCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTa > 1:31400297/1‑67 (MQ=255) ggCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTa > 1:8520364/1‑67 (MQ=255) ggCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTAt < 1:509435/68‑1 (MQ=255) gCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATc > 1:35167782/1‑68 (MQ=255) gCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:5365255‑M1/54‑1 (MQ=255) tGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAAc < 1:27862891/68‑1 (MQ=255) cATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:15087241/58‑1 (MQ=255) aTAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCAc < 1:29569658/68‑1 (MQ=255) aTAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCAc < 1:8208133/68‑1 (MQ=255) aaacgccactctgtctacggcaccttgaatggttcgcactccggCGCAGCGCCGCAATCCAActccc < 1:35776480‑M1/23‑3 (MQ=255) tgAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg < 1:19197214/67‑1 (MQ=255) gAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAGCTCACCggg > 1:37903457/1‑67 (MQ=255) gAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCCCCGGt > 1:22088638/1‑68 (MQ=255) aGTGAGGCATCTGTCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:21414814/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCGCCGGtt > 1:37470706/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:23685303/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:26109306/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:7273781/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:11285319/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:21620198/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:4861097/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:17241016/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:17789466/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:38276021/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:20085332/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCCGtt > 1:24071690/1‑68 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:30600627/67‑1 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:16053707/67‑1 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:6323284/67‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:10031878/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:12794860/68‑1 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:34089138/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:7874163/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:13451314/1‑68 (MQ=255) gCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:587752/1‑67 (MQ=255) cATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGca < 1:32730524/67‑1 (MQ=255) cATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCAGCTATCGAACTCACCGGTTACCGca < 1:36452311/67‑1 (MQ=255) aTCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGCACTCACCGGTTACCGcaca > 1:15744393/1‑68 (MQ=255) aTCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGcaca > 1:28138343/1‑68 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:18675427/68‑1 (MQ=255) tGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTa < 1:28888558/68‑1 (MQ=255) ccACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtg > 1:29228793‑M1/1‑38 (MQ=255) gcacgttgattggttcgctctccggCGCTGCGCCGCTTTCGACCTCCCCGGTTACCGCACGGGAGCCg < 1:38633111‑M1/43‑1 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgag > 1:20873383‑M1/1‑36 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:22291552/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:31680143/1‑68 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcg > 1:27085063‑M1/1‑32 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:30423899/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:4248896/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:17083521/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:34383526/1‑67 (MQ=255) cTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGa < 1:19553084/64‑1 (MQ=255) cTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCa < 1:39092231/67‑1 (MQ=255) cTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCa < 1:25896044/67‑1 (MQ=255) gAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACcg < 1:10994601/68‑1 (MQ=255) ttggttcgctctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACcggc > 1:33425342‑M1/17‑68 (MQ=255) aGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgc > 1:17455544‑M2/1‑66 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:16787211‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:26741681‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACACTAGCCGATCACCGgcg < 1:36039194‑M2/68‑4 (MQ=255) tAGCCAGCATCATTGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:8765563‑M2/1‑63 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:20579211‑M2/1‑63 (MQ=255) gCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgc > 1:26443571‑M1/1‑22 (MQ=255) gCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgc < 1:25679191‑M2/68‑8 (MQ=255) gCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgc < 1:22962480‑M2/68‑8 (MQ=255) cgctctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCa > 1:24505380‑M1/11‑68 (MQ=255) ccAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtacccggtgagttcgatagcggcgca > 1:24924956‑M1/1‑21 (MQ=255) ccAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca < 1:19723088‑M2/68‑9 (MQ=255) cagcagGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca > 1:25354077‑M2/1‑59 (MQ=255) tcaggATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcg > 1:16474720‑M2/2‑57 (MQ=255) ctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcg < 1:14285145‑M1/61‑1 (MQ=255) agGATCGCTGCGCCGCcggggatcggcgacggtgcggtaaccggtgagttcgatagcggcgcagcga > 1:10337584‑M1/1‑16 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:14781779‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:6984443‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:13998524‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:32038040‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:12092156/67‑1 (MQ=255) agGAGCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:7535923‑M2/1‑55 (MQ=255) aTCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggggagttcgatagcggcgcagcgat > 1:36750044‑M1/1‑13 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:1172962/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGga > 1:30897861/1‑68 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGAGCACCGGCGGCGCAGCGcc < 1:29965028/65‑1 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCTGCGCCGgaga < 1:35401764‑M1/68‑1 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGATACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:13749774‑M1/1‑68 (MQ=255) | TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGA > CP009273/442606‑442740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |