| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 678193 | 214 (0.450) | 10 (0.030) | 8/94 | NT | 5.5% | coding (657/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription |
| ? | CP009273 | = 678254 | 164 (0.410) | coding (596/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription | |||||
Only 100 of 247 total aligned reads displayed.
ATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTTGTCG > CP009273/678126‑678259 | tttGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACAt > 1:27635450/1‑67 (MQ=255) gCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCcgcgcg < 1:34231589/68‑1 (MQ=255) ttCCACACAGGCTTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCTCGtt < 1:24977952/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:16271995/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:2896564/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:29372668/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:15052941/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:13471111/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:32883096/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:25935030/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:16358876/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:29786299/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:30149476/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:37039445/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:17624214/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:37884402/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:4297143/68‑1 (MQ=255) acaGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTaaa > 1:18566335/1‑67 (MQ=255) cGTTCAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATGCGCGCGTTTTAAAACCTc < 1:12737909/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAAcc < 1:8214996/65‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCt < 1:23424423/66‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCt < 1:27011052/66‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:20067988/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:12168673/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:38222837/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:5478180/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:10025801/67‑1 (MQ=255) catggCTGCCAGTTCACTATCGTTAAGGGTGGTCATGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:744335/65‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:11798458/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:26569010/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:8619393/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:33351615/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:32450485/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:25151209/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:23402457/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:5846132/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:16910666/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:17194326/68‑1 (MQ=255) aGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAcc < 1:2877623/68‑1 (MQ=255) aGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAcc < 1:30294843/68‑1 (MQ=255) aGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAcc < 1:21146789/68‑1 (MQ=255) cTGCCAGTTCACTCTCGTTAAGCGTGTTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:36354718/68‑1 (MQ=255) cTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCa < 1:9090311/66‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGGGTTTTAAAACCTCATCGACCAGc < 1:37138824/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:30495404/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:3169275/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:7746195/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:14814421/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:4438663/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:14276418/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:1167481/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:7603342/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:34620556/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:38583444/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:35747090/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:36820594/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:1329101/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:12044381/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:11404196/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:21672028/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:22280767/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:2290114/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:18451823/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:6573532/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:24190116/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:24481659/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:25691511/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:26809600/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:17008846/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:27444325/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:16530134/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:6693639/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:18244277/68‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:9260153/68‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:22029332/68‑1 (MQ=255) aGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATg > 1:25376848/1‑68 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:7266183/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:14561261/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg < 1:20191492/66‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg < 1:2380099/66‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGt < 1:33158590/68‑1 (MQ=255) ctcGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAAt < 1:1577063/68‑1 (MQ=255) ctcGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAAt < 1:20528013/68‑1 (MQ=255) tAAGCGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttt > 1:28590467‑M1/1‑20 (MQ=255) cGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaa > 1:32223307‑M1/1‑16 (MQ=255) gTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacc < 1:38941738/68‑1 (MQ=255) gTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacc < 1:3994532/68‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:35195811/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:4735967/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:68277/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGAAAAATCTTCGccacca < 1:3381891/67‑1 (MQ=255) tCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:19271677/48‑1 (MQ=255) ccTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg > 1:9692165/1‑46 (MQ=255) ccTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGa < 1:15926496/67‑1 (MQ=255) ggCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGt < 1:11130471/68‑1 (MQ=255) gACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgt > 1:13499031‑M2/1‑65 (MQ=255) aCAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatgtc > 1:39087418‑M1/1‑3 (MQ=255) cAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatgtc > 1:27276340‑M1/1‑2 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:27856166‑M2/1‑63 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:27812052‑M2/1‑63 (MQ=255) | ATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTTGTCG > CP009273/678126‑678259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |