| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 830751 = | 513 (1.090) | 26 (0.060) | 10/98 | NT | 6.5% | coding (48/963 nt) | ybiB | putative family 3 glycosyltransferase |
| ? | CP009273 | 830783 = | 296 (0.720) | coding (80/963 nt) | ybiB | putative family 3 glycosyltransferase | |||||
Only 100 of 613 total aligned reads displayed.
AGTCAGGTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTCCCT > CP009273/830684‑830817 | gTCAGGTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCAc > 1:23955244/1‑67 (MQ=255) gTCAGGTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCAc > 1:8135182/1‑67 (MQ=255) gTCAGGTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCAc > 1:32575339/1‑67 (MQ=255) aatcaatacgccgcccaactcaaggtcagggacttcaccattgagcatatgagcatacagaccgcgc > 1:26251615‑M1/63‑67 (MQ=255) gTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCAcgcgcgc > 1:12443173/1‑68 (MQ=255) gTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCAcgcgcgc > 1:6383065/1‑68 (MQ=255) gTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCAcgcgcgc > 1:5625157/1‑68 (MQ=255) atcaatacgccgcccaactcaaggtcagggacttcaccattgagcatatgagcatacagaccgcgcgc > 1:18259686‑M1/62‑68 (MQ=255) atcaatacgccgcccaactcaaggtcagggacttcaccattgagcatatgagcatacagaccgcgcgc > 1:4516080‑M1/62‑68 (MQ=255) ggAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGAtt > 1:5367122/1‑68 (MQ=255) gAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGAttt > 1:36203406/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:10280427/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:19309463/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:32045588/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:33019676/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:36557842/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:7247191/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:9513543/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:10030479/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCAATAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:4326381/1‑68 (MQ=255) aGTCGTAAATGGACTATCGCAAAATCAATAAAGAGATCGGCCGCGGGAAAAACCACGCGCGCGATTTa > 1:7467079/1‑68 (MQ=255) aGTCGTAAATGGACAATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTa > 1:33393115/1‑68 (MQ=255) gTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGAcc < 1:24184622/68‑1 (MQ=255) gTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGAcc < 1:20883936/68‑1 (MQ=255) gTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGAcc < 1:9798936/68‑1 (MQ=255) gTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGAcc < 1:17841527/68‑1 (MQ=255) tAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCg > 1:14880082/1‑68 (MQ=255) aaaTGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCgg < 1:30508190/68‑1 (MQ=255) aaaTGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCgg < 1:21157329/68‑1 (MQ=255) aaaTGGACTATCGCAAAAGCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCgg < 1:13797300/68‑1 (MQ=255) aaTGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCggg < 1:34253831/68‑1 (MQ=255) aTGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGa > 1:24863086/1‑68 (MQ=255) aTGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGa > 1:23643619/1‑68 (MQ=255) tGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGAt < 1:15933721/68‑1 (MQ=255) gACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGAt > 1:9049433/1‑66 (MQ=255) aCTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGAt > 1:21294318/1‑65 (MQ=255) aCTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGAt > 1:24538927/1‑65 (MQ=255) aCTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGAt > 1:35958583/1‑65 (MQ=255) aCTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGAt > 1:3832258/1‑65 (MQ=255) cGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTgcgc > 1:21703948/1‑67 (MQ=255) tcagggacttcaccattgagcatatgagcatacagacCGCGCGCGAGTTAGACCGGGATACTgcgcgc < 1:31780063‑M1/31‑1 (MQ=255) aaaaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCgg > 1:39015392/1‑68 (MQ=255) aaaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGt < 1:19675361/68‑1 (MQ=255) aaaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGt < 1:6087115/68‑1 (MQ=255) aaaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGt < 1:16994637/68‑1 (MQ=255) aaaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGt < 1:20490339/68‑1 (MQ=255) aaaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGt < 1:2729921/68‑1 (MQ=255) aaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCgg > 1:22660764/1‑66 (MQ=255) aaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCgg > 1:38749014/1‑66 (MQ=255) aaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCgg > 1:24741718/1‑66 (MQ=255) aaTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTc < 1:13029352/68‑1 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCgg > 1:17594527/1‑65 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCgg > 1:20226123/1‑65 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGtgt > 1:35321616/1‑66 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCt < 1:37179338/68‑1 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCt < 1:33904163/68‑1 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCt < 1:10766655/68‑1 (MQ=255) aTCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCt < 1:23062246/68‑1 (MQ=255) cATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGt < 1:35646523/68‑1 (MQ=255) cATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGt < 1:7762616/68‑1 (MQ=255) cATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGt < 1:17285729/68‑1 (MQ=255) cATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGt < 1:2798717/68‑1 (MQ=255) ttAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtat < 1:14181143/68‑1 (MQ=255) aaGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgct < 1:11268667/68‑1 (MQ=255) aaGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgct < 1:16242981/68‑1 (MQ=255) aaGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgct < 1:13305931/68‑1 (MQ=255) aaGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgct < 1:32718900/68‑1 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGCCCGGGATACTGCGCGCGGTCTGtatgctc > 1:22459299/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGCCCGGGATACTGCGCGCGGTCTGtatgctc > 1:31377954/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:25274894/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:18678350/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:2567439/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:2610211/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:36883926/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:6659355/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:15769407/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:34767317/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:16553701/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:28851101/1‑68 (MQ=255) agagATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctc > 1:2941452/1‑68 (MQ=255) tgagcatatgagcatacagacCGCGCGCGATTTAGACGGGGATTCAGCGCGCGGTCTGtatgctcata < 1:49889‑M1/47‑1 (MQ=255) gaTCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctca < 1:18825642/66‑1 (MQ=255) tCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctcatat > 1:19946238/1‑67 (MQ=255) gcatatgagcatacagacCGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctcatat < 1:27718740‑M1/48‑1 (MQ=255) cGGGCGCTGGAAAAACCACGCGCGCGATTTAGACCCGGATTCTGCGCGCGGTCTGtatgctcatatgc < 1:28277420/68‑1 (MQ=255) cGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctcatatgc < 1:34457662/68‑1 (MQ=255) cGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctcatatgc < 1:33613067/68‑1 (MQ=255) cGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctcatatgc < 1:30119788/68‑1 (MQ=255) cgcgGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGtatgctcatatgctca < 1:11773364/67‑1 (MQ=255) gcgGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAAt < 1:26562333/68‑1 (MQ=255) gggAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATgg < 1:30827731/68‑1 (MQ=255) agcatacagacCGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATgg < 1:37660771‑M1/57‑1 (MQ=255) aaCCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTGATATGCTCAATGGTGAAg > 1:471620/1‑67 (MQ=255) aaCCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGt < 1:6874238/68‑1 (MQ=255) aaCCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGt < 1:14619986/68‑1 (MQ=255) aCCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTc < 1:15240250/68‑1 (MQ=255) aCCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTc < 1:2706997/68‑1 (MQ=255) gacCGCGCGCGATTTAGACCGGGATACTGAGCGCGGTCTGTAGGCTCATATGCGCTATGGTGAAGTc < 1:8673271‑M1/64‑1 (MQ=255) cACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTc > 1:27566911/1‑66 (MQ=255) acCGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTc < 1:26856185‑M1/64‑1 (MQ=255) | AGTCAGGTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTCCCT > CP009273/830684‑830817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |