New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 1834892 =472 (1.000)26 (0.060) 8/100 NT 6.9% coding (1169/1308 nt) ynjE molybdopterin synthase sulfurtransferase
?CP009273 1834923 = 284 (0.670)coding (1200/1308 nt) ynjE molybdopterin synthase sulfurtransferase

Only 100 of 573 total aligned reads displayed.

CTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGC  >  CP009273/1834826‑1834959
                                                                  |                                                                   
ttttttggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatggc                                                                    >  1:32570248‑M1/67‑68 (MQ=255)
 tATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGgcgc                                                                    >  1:4132606/1‑67 (MQ=255)
   tttggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatgGcgcg                                                                 >  1:22115608‑M1/64‑68 (MQ=255)
    gtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGcgcgcg                                                                 >  1:27977635/1‑67 (MQ=255)
    gtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGcgcgcg                                                                 >  1:8462551/1‑67 (MQ=255)
      ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTcc                                                              >  1:31656664/1‑68 (MQ=255)
      ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTcc                                                              >  1:12281205/1‑68 (MQ=255)
      ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTcc                                                              >  1:36748121/1‑68 (MQ=255)
      ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTcc                                                              >  1:17457773/1‑68 (MQ=255)
      ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTc                                                               <  1:12970487/67‑1 (MQ=255)
         aaGCGTGGAATATCAAACCACAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGGGCGTCCGaa                                                           >  1:8737517/1‑68 (MQ=255)
          aGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaa                                                           >  1:33909148/1‑67 (MQ=255)
           gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaaa                                                          >  1:31106673/1‑67 (MQ=255)
           gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaaa                                                          >  1:11879691/1‑67 (MQ=255)
           gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaaa                                                          >  1:9104576/1‑67 (MQ=255)
           gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaaa                                                          >  1:21187746/1‑67 (MQ=255)
           gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaaa                                                          >  1:20957340/1‑67 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAcc                                                        <  1:9571122/67‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAcc                                                        <  1:2700162/67‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAcc                                                        <  1:5554463/67‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAcc                                                        <  1:18561702/67‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAcc                                                        <  1:33056593/67‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAc                                                         <  1:36497894/66‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAc                                                         <  1:29751623/66‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAc                                                         <  1:32339891/66‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAAc                                                         <  1:21444391/66‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCt                                                       <  1:1712667/68‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCt                                                       <  1:14261287/68‑1 (MQ=255)
             gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCAACTGCGGCACCGGCTGGCGCGCGTCCGAAAc                                                         <  1:39140069/66‑1 (MQ=255)
               ggAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCtt                                                      <  1:36057855/67‑1 (MQ=255)
                  atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTAt                                                   <  1:35495093/67‑1 (MQ=255)
                  atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTAt                                                   <  1:24401112/67‑1 (MQ=255)
                  atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATg                                                  >  1:21769880/1‑68 (MQ=255)
                    atCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGt                                                 >  1:37873127/1‑67 (MQ=255)
                       aaaCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgc                                             >  1:15858343/1‑68 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCCCCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:18008759/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:37298327/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:2685097/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:25016927/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:32017984/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:7214583/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:19775279/1‑67 (MQ=255)
                          ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                           >  1:38513707/1‑67 (MQ=255)
                           cAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcacgc                                         <  1:25917/68‑1 (MQ=255)
                               gcggcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCAcgcg                                        <  1:38305140/62‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGGGCGTCCGAAACCTTTATGTACGCACgcgc                                       <  1:23113084/66‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCAcgcg                                        <  1:34193485/65‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCAcgcg                                        <  1:9816068/65‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCAcgcg                                        <  1:8108099/65‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCAcgcg                                        <  1:4690862/65‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCAcgcg                                        <  1:7375390/65‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGcc                                      <  1:26269976/67‑1 (MQ=255)
                               gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCa                                     >  1:27616410/1‑68 (MQ=255)
                                 agcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATg                                   >  1:13927542/1‑68 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCTGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:20088622/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:28267585/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:31253845/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:36256891/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:23776918/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:5920295/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                 <  1:34385334/67‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATg                                   <  1:13358237/65‑1 (MQ=255)
                                    aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGt                                >  1:30787503/1‑68 (MQ=255)
                                        ttCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg                             <  1:37657262/67‑1 (MQ=255)
                                        acggaaacattcttccaacccaTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga                            <  1:38814400‑M1/46‑1 (MQ=255)
                                          acggaaacattcttccaacccatgGCGCGTCCGAAACCTTTATGTCCGCACGCGCCATGGGTTGgaag                          <  1:25298902‑M1/44‑1 (MQ=255)
                                           aTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga                         <  1:20332026/68‑1 (MQ=255)
                                           aTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga                         <  1:23937337/68‑1 (MQ=255)
                                           aTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga                         <  1:29254628/68‑1 (MQ=255)
                                             tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt                       >  1:21620993/1‑68 (MQ=255)
                                             tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt                       >  1:22661570/1‑68 (MQ=255)
                                             tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt                       >  1:6393675/1‑68 (MQ=255)
                                             tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt                       >  1:30497764/1‑68 (MQ=255)
                                             tCTACTGCGGCACCGGCTGGCCCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt                       <  1:6735922/68‑1 (MQ=255)
                                              cTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATg                      >  1:7702594/1‑68 (MQ=255)
                                               tACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt                     <  1:28718232/68‑1 (MQ=255)
                                                aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt                    >  1:19537710/1‑68 (MQ=255)
                                                aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt                    >  1:10611409/1‑68 (MQ=255)
                                                aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt                    >  1:11615424/1‑68 (MQ=255)
                                                aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt                    >  1:23470853/1‑68 (MQ=255)
                                                 cTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt                   <  1:13555283/68‑1 (MQ=255)
                                                  tGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt                   >  1:10034823/1‑67 (MQ=255)
                                                  tGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt                   >  1:5294315/1‑67 (MQ=255)
                                                  attcttccaacccatgGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt                   <  1:15349603‑M1/51‑1 (MQ=255)
                                                    tcttccaacccatgGCGCGTCCGAAACCTTTATGTACGCGCGCGCAATGGGTTGGAAGAATGATTCCg                <  1:2950363‑M1/54‑1 (MQ=255)
                                                     ggCACCGGCTGGGGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt               <  1:33583041/68‑1 (MQ=255)
                                                     ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt               <  1:16660253/68‑1 (MQ=255)
                                                     ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt               <  1:18955496/68‑1 (MQ=255)
                                                     ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt               <  1:6928836/68‑1 (MQ=255)
                                                     ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt               <  1:20652536/68‑1 (MQ=255)
                                                     ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt               >  1:27323025/1‑68 (MQ=255)
                                                        aCCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtgt             <  1:2414760/67‑1 (MQ=255)
                                                        aCCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTa            >  1:18363748/1‑68 (MQ=255)
                                                           ggCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGa         <  1:36951759/68‑1 (MQ=255)
                                                            cccatgGCGCGTCCGAAACCGTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTatgcc        <  1:34806751‑M1/62‑3 (MQ=255)
                                                                GCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg    <  1:24700641‑M1/68‑1 (MQ=255)
                                                                 gGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg    <  1:6299317‑M1/66‑1 (MQ=255)
                                                                 CGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg    <  1:15115360‑M1/67‑1 (MQ=255)
                                                                 CGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg    <  1:5828263‑M1/67‑1 (MQ=255)
                                                                  GCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg    <  1:23255714‑M1/66‑1 (MQ=255)
                                                                  |                                                                   
CTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGC  >  CP009273/1834826‑1834959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.