| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 472 (1.000) | 26 (0.060) | 8/100 | NT | 6.9% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 284 (0.670) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 468 total aligned reads displayed.
GCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834857‑1834988 | gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGcc < 1:28424112/67‑1 (MQ=255)gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGcc < 1:12374508/67‑1 (MQ=255)gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCa > 1:5891391/1‑68 (MQ=255) agcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATg > 1:13927542/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:16849853/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:37723613/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:4080570/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:36256891/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:3469391/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:25264623/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg < 1:24827704/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:37823921/1‑68 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:21446962/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga > 1:15839294/1‑68 (MQ=255) acggaaacattcttccaacccaTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:38814400‑M1/46‑1 (MQ=255) acacggaaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGga < 1:6369682‑M2/11‑1 (MQ=255) acggaaacattcttccaacccatgGCGCGTCCGAAACCTTTATGTCCGCACGCGCCATGGGTTGgaag < 1:1048194‑M1/44‑1 (MQ=255) aTTCTACTGCGGCACGGGCTGGCGCGCGTCCGATACCTTTATGTAGGCACGCGCCATGGGTTGgaagt < 1:29468521/68‑2 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:29208734/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:6964106/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:8364177/68‑1 (MQ=255) ttCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaagaa < 1:22693251/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:31321299/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:30497764/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:6393675/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:21162446/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:21636181/68‑1 (MQ=255) cTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATg > 1:23649784/1‑68 (MQ=255) tACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:4583932/68‑1 (MQ=255) tACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:6133329/68‑1 (MQ=255) tACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:33016706/68‑1 (MQ=255) tACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:28718232/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:975728/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:19537710/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt < 1:5429483/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:6891535/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCGTACGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:31614390/1‑68 (MQ=255) tGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt > 1:10034823/1‑67 (MQ=255) attcttccaacccatgGCGCGTCCGCAACCTGTATGTACGCACGCGCCATGGGTGGGAAGATTGttt < 1:17810338‑M1/51‑1 (MQ=255) gCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTcc > 1:568787/1‑68 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:8022326/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:18955496/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:34273943/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:15394069/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:38680667/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:2776308/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:27323025/1‑68 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:27131302/68‑1 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:24418100/1‑68 (MQ=255) ggCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:23876431/68‑1 (MQ=255) cttccaacccatggcgcgtgcggacataaaggtttcggacgcgcCATGGGTTGGAAGAATGTTTCCgt < 1:25298902‑M2/24‑1 (MQ=255) cACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtg < 1:11787396/67‑1 (MQ=255) aCCGGCTGGCGCGCGTCCGATACCTTTATGTACGCACGCGCGATGGGTTGGAAGAATGTTTCCgtgt < 1:23405425/67‑1 (MQ=255) aCCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTa > 1:20846084/1‑68 (MQ=255) aCCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTa > 1:9132640/1‑68 (MQ=255) cccaTGGCGCGCGTCCGAAACCTTTATGTACGCCCGCGCCATGGGTTGGAAGAATGTTTCCGTGGATg < 1:35532726‑M1/64‑1 (MQ=255) cccaTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATg < 1:16114764‑M1/64‑1 (MQ=255) cGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATg < 1:18532054/68‑1 (MQ=255) cGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATg < 1:20334566/68‑1 (MQ=255) ggCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGa < 1:36951759/68‑1 (MQ=255) cccatgGCGCGTCCGAAACCTTTATGTTCGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAc < 1:13139239‑M1/62‑1 (MQ=255) cccatgGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAc < 1:21760156‑M1/62‑1 (MQ=255) cccatgGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGGTGGAAGAATGGTTCCGTGTATGAc < 1:1350373‑M1/62‑1 (MQ=255) cTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcg > 1:10786336/1‑68 (MQ=255) cTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTCGAAGAATGTTTCCGTGTATGAc > 1:33404467/1‑67 (MQ=255) cGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggc < 1:7325216‑M1/67‑1 (MQ=255) CGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:31873474‑M1/65‑1 (MQ=255) CGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg < 1:26891901‑M1/68‑1 (MQ=255) GTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:7772345‑M1/1‑67 (MQ=255) GTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:36501354‑M1/1‑67 (MQ=255) GTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGt > 1:14911825‑M1/1‑68 (MQ=255) GTCCGAAACCTTTATGTACGCACGCGCCATGGGGTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGt > 1:33855947‑M1/1‑68 (MQ=255) GTCCGAAACCTTTATGGACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:34827025‑M1/1‑67 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:11604839/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:8828863/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:31137199/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa > 1:4844653/1‑68 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:22853790/68‑1 (MQ=255) aaCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAAt < 1:28097296/68‑1 (MQ=255) cTTTCTGTACGCTCGCGCCATGGGTTGGAATAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:26050456/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:6674004/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:32363321/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:24339125/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:30106917/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:36698876/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:20158395/68‑1 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTTGTAAGAATGGatcagc > 1:35214175/1‑68 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:19994533/1‑68 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:35790733/1‑68 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:15277415/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:1282666/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:19855573/1‑68 (MQ=255) gTACGCACGCGCCATCGGTTGGTAGAATGTTTACGTCTATGACGGCGGCTGGTACGAATGGagcagcc > 1:22489102/1‑67 (MQ=255) acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGa < 1:37443271/67‑1 (MQ=255) acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGa < 1:3080420/67‑1 (MQ=255) acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGAt < 1:14540591/68‑1 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:27519312/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:8585015/1‑68 (MQ=255) cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCaaa > 1:22115608‑M2/6‑68 (MQ=255) gcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCaaaaaa > 1:32570248‑M2/3‑68 (MQ=255) | GCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834857‑1834988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |