New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3615265	NA (NA)	6 (0.010)	4/100	NT	100%	coding (2714/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor
	?	CP009273	= 3615283	0 (0.000)					coding (2732/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor

CGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATA  >  CP009273/3615212‑3615330                                                      |                                                                  cGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGC                                                      >  1:4973640‑M2/1‑67 (MQ=255)  gTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCT                                                    >  1:23470567‑M2/1‑68 (MQ=255)  gTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCC                                                     >  1:28967098‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGTATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:37607852‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCCGAGACCCGGCAGGTAACCGCCTG                                                   <  1:23066297‑M2/67‑1 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:12437806‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:25047069‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:23324789‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:2033377‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:18706077‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGC                                                  >  1:18563843‑M2/1‑68 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:4662865‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   <  1:33894984‑M2/67‑1 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   <  1:6037049‑M2/67‑1 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:31293354‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:26627194‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   <  1:27268464‑M2/67‑1 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:27043706‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:26627173‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:21309498‑M2/1‑67 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   <  1:1403942‑M2/67‑1 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTG                                                   <  1:13561935‑M2/67‑1 (MQ=255)    tCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTAAGCCTCAGACCCGGCAGGTAACCGCCTGC                                                  >  1:12612768‑M2/1‑68 (MQ=255)    gcacacCACCGCAGCGAATCTGGATATCCGCATCCCGAATGCCACAGACCCGGCAGGTAACCGCCTG                                                   >  1:36949206‑M2/2‑67 (MQ=255)     cacaGCACCGCAGCGAATCTGGATATCCGCTTCCCGTATGCCACTGACCCGGCAGGTAACCGCCTGC                                                  >  1:26673286‑M2/1‑67 (MQ=255)       caccacCGCAGCGAATCTGGATATCCGCATCCCGTATGCCCCAGACCCGGCTCGTAACATCCTGCCg                                                <  1:38287196‑M2/67‑2 (MQ=255)             cGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCgggtctgt                                         >  1:36157942‑M2/1‑60 (MQ=255)             cGCAGCGAATCTGGATATCCGCATCCCGTATCCCACAGACCCGGCAGGTAACCGCCTGCCgggtctgt                                         >  1:24253971‑M2/1‑60 (MQ=255)                                                 aGACCCGGCAGGTAACCGCCTGCCgggtctgtggcattcgggatgcggatatccagattcgctgcggt     <  1:8988383‑M2/68‑45 (MQ=255)                                                 aGACCCGGCAGGTAACCGCCTGCCgggtctgtggcatacgggatgcggatatccagattcgctgcggt     <  1:29698340‑M2/68‑45 (MQ=255)                                                    cccGGCAGGTAACCGCCTGCCgggtctgtggcatacgggatgcggatatccagattcgctgcggtggt  <  1:11223957‑M2/68‑48 (MQ=255)                                                      |                                                                  CGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATA  >  CP009273/3615212‑3615330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.