| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4620353 | 393 (0.830) | 9 (0.020) | 3/94 | NT | 2.6% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 347 (0.880) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 700 total aligned reads displayed.
GCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAA > CP009273/4620315‑4620449 | aTGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAa > 1:23255098‑M2/1‑66 (MQ=255) tGGTATAAACGATTTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAagg > 1:14389570‑M2/1‑65 (MQ=255) tGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAagg > 1:16746403‑M2/1‑65 (MQ=255) gggataCACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGc < 1:34074260/65‑1 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:35048791‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:20823543‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:33829868‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:18587108‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:15437168‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTCGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:24104950‑M2/68‑6 (MQ=255) ataAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaa < 1:137983‑M2/68‑8 (MQ=255) ataAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaa < 1:30968816‑M2/68‑8 (MQ=255) ataAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaa < 1:17790647‑M2/68‑8 (MQ=255) ataAACGAATTGAGCCACGTTGCACTTCGCCTCTATGGTTATCGTGATAATGAGTATTCAAaggcgaa < 1:35415520‑M2/68‑8 (MQ=255) taAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaag > 1:38137755‑M2/1‑60 (MQ=255) taAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaag > 1:7814993‑M2/1‑60 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:37438982‑M2/1‑59 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:16992793‑M2/1‑59 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:29685460‑M2/1‑59 (MQ=255) aaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtg < 1:29121147/68‑1 (MQ=255) aCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtgt > 1:20200371/1‑68 (MQ=255) aCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtgt > 1:10947856/1‑68 (MQ=255) aCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtgt > 1:27687009/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCTTGATAATGAGTTTTAAAAGGCGAAGTGTa > 1:2632256/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:29862159/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:34308689/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:34658902/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:419600/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:29409330/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:25175551/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:26076926/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:28673857/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:1002088/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:2108489/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:12668815/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:12231821/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:9453010/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:36874/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:17533697/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:19922097/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTCTTCAAAGGCGAAGTGTa > 1:35726714/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGAATTCAAAGCCGAAGTGTa > 1:610301/1‑68 (MQ=255) cGAATTCAGCCACGTAGGACTTAGCCACTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagtca < 1:20573286‑M2/67‑12 (MQ=255) aTTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGc < 1:33165852/67‑1 (MQ=255) ttGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCt > 1:18970061/1‑68 (MQ=255) gCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCtttt > 1:27971079/1‑67 (MQ=255) ccACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCttttt > 1:21532906/1‑67 (MQ=255) cACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCttttt < 1:14116649/66‑1 (MQ=255) tGGCCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagtccaacgtggctcaattcg > 1:10571690‑M2/1‑41 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGc < 1:25795547/67‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGc < 1:37918867/67‑1 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:30812248/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:2887080/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:32698120/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:36162780/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:2396332/1‑68 (MQ=255) aCTTCGCCTCTATGTTTAACGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:39027941/1‑68 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:32225299/1‑67 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:10358501/1‑67 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:17261363/1‑67 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:19308601/1‑67 (MQ=255) tctATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGcc > 1:30182555/1‑68 (MQ=255) tATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCgg > 1:4952055/1‑68 (MQ=255) aTGGTTATCGGGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTACTCCCAGCCGGt < 1:15248437/68‑1 (MQ=255) tGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTc < 1:700810/68‑1 (MQ=255) tGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTc < 1:4456974/68‑1 (MQ=255) tGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTc < 1:37276811/68‑1 (MQ=255) tGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTc < 1:8257616/68‑1 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:22978243/1‑68 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:22104303/1‑68 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGATCg > 1:7243139/1‑68 (MQ=255) ttATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGa > 1:33564053/1‑67 (MQ=255) ttATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGa < 1:5509537/67‑1 (MQ=255) tATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATc > 1:3129022/1‑68 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:23631882/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:25472206/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:14867802/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:5645657/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:24910173/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:22472049/1‑67 (MQ=255) cGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCAcc < 1:8796408/68‑1 (MQ=255) cGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCAcc < 1:11428781/68‑1 (MQ=255) aTAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTc > 1:18182915/1‑67 (MQ=255) tAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCg < 1:30621808/67‑1 (MQ=255) tAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCg < 1:16067836/67‑1 (MQ=255) aaTGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCa < 1:6414188/68‑1 (MQ=255) tGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagt > 1:28258229/1‑68 (MQ=255) tGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagt > 1:27394660/1‑68 (MQ=255) aGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaa > 1:36474804/1‑68 (MQ=255) tttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa < 1:31685626/67‑1 (MQ=255) tttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa < 1:25052785/67‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:38784280/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:38477426/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:27028376/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:7417240/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:8983176/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:11743175/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:971248/68‑1 (MQ=255) cAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagtaa > 1:13505055/1‑68 (MQ=255) aaGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAgtaaaagtaaaa > 1:19719148/1‑68 (MQ=255) | GCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAA > CP009273/4620315‑4620449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |