| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2694210 = | 310 (0.660) | 12 (0.030) | 8/90 | NT | 5.6% | coding (148/381 nt) | acpS | holo‑[acyl‑carrier‑protein] synthase 1 |
| ? | CP009273 | 2694239 = | 159 (0.420) | coding (119/381 nt) | acpS | holo‑[acyl‑carrier‑protein] synthase 1 | |||||
Only 100 of 381 total aligned reads displayed.
TTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGC > CP009273/2694172‑2694306 | tttGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCa < 1:17373381/68‑1 (MQ=255) tttGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCa < 1:4091583/68‑1 (MQ=255) tttGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCa < 1:20453624/68‑1 (MQ=255) tttGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGGGCGTTTTCCa < 1:36866978/68‑1 (MQ=255) gctgcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGAt < 1:8076866/68‑1 (MQ=255) gctgcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGAt > 1:24510840/1‑68 (MQ=255) tgcGGCTTCTTTCACAGCAAACCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATa > 1:16556401/1‑67 (MQ=255) gcgtattaagcgataacgaatgggctatctggaaaacgcaccaccagccggtgcgttttcCAGATAGc < 1:22940674‑M2/8‑1 (MQ=255) gcGGGTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCGGGCGGTGCGTTTTCCAGATAGc < 1:29422142/68‑1 (MQ=255) gcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGc < 1:10036288/68‑1 (MQ=255) gcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGc < 1:16124995/68‑1 (MQ=255) gcGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGc < 1:37274473/68‑1 (MQ=255) gtattaagcgataacgaatgggctatctggaaaacgcaccaccagccggtgcgttttcCAGATAGccc < 1:606300‑M2/10‑1 (MQ=255) cttcttTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCAt > 1:37138085/1‑68 (MQ=255) ttctttctCAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCAt < 1:8820209/67‑1 (MQ=255) tcttTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTc < 1:2631481/68‑1 (MQ=255) cttTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCg < 1:25781275/68‑1 (MQ=255) cttTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCg < 1:19719808/68‑1 (MQ=255) tttCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGTTGGTGCGTTTTCCAGATAGCCCATTCGt < 1:11337036/68‑1 (MQ=255) tttCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGt < 1:13827359/68‑1 (MQ=255) agcgataacgaatgggctatctgGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGt < 1:21145766‑M1/45‑1 (MQ=255) gcgataacgaatgggctatctgGAAAACGCACCGGCTGGTGGTGCGGTTTCCAGATAGCCCATTCGtt < 1:33596265‑M1/46‑1 (MQ=255) acaGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATc > 1:22737604/1‑68 (MQ=255) acaGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATc > 1:27045269/1‑68 (MQ=255) acaGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATc > 1:30870950/1‑68 (MQ=255) aGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATc > 1:31220769/1‑66 (MQ=255) gCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCt > 1:23066525/1‑68 (MQ=255) aataCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:22274258/62‑1 (MQ=255) aaaaCTCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:23512678/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCg < 1:37546371/64‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCg < 1:16901194/64‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:9724373/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:27617391/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:24122382/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:13265973/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:15651658/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:5914375/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:19458670/65‑1 (MQ=255) aaaaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGc < 1:18222744/65‑1 (MQ=255) atgggctatctgGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAAt < 1:36153241‑M1/56‑1 (MQ=255) aaCGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAAt < 1:39109778/68‑1 (MQ=255) gCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTTATAc > 1:22043831/1‑67 (MQ=255) gCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATAc > 1:20738357/1‑67 (MQ=255) gCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATAc > 1:4703498/1‑67 (MQ=255) gCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATAc > 1:38566588/1‑67 (MQ=255) gCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACgcggcg < 1:9803304/68‑1 (MQ=255) gCCAGAAAACGCACCGGCTGGTGGGGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACgcggcg < 1:35492254/68‑1 (MQ=255) cAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGt < 1:14456454/67‑1 (MQ=255) cAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGt < 1:7088786/67‑1 (MQ=255) cAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGt < 1:32911324/67‑1 (MQ=255) gGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTg < 1:28558315‑M1/66‑1 (MQ=255) aGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTg > 1:10506501/1‑67 (MQ=255) AAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAg < 1:8322916‑M1/68‑1 (MQ=255) AAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAg < 1:21789589‑M1/68‑1 (MQ=255) AACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAgg > 1:4889149‑M1/1‑68 (MQ=255) AACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAgg > 1:18478908‑M1/1‑68 (MQ=255) AACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAg < 1:30476010‑M1/67‑1 (MQ=255) ACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGc > 1:21321389‑M1/1‑68 (MQ=255) ACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGc < 1:18864867‑M1/68‑1 (MQ=255) GCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGa < 1:14963670‑M1/68‑1 (MQ=255) GCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGa < 1:36380176‑M1/68‑1 (MQ=255) GCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGa < 1:25278217‑M1/68‑1 (MQ=255) CACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGa < 1:23816487‑M1/67‑1 (MQ=255) ACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGAt > 1:864073‑M1/1‑67 (MQ=255) ACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATc > 1:6221148‑M1/1‑68 (MQ=255) ACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATc > 1:38120588‑M1/1‑68 (MQ=255) ACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATc > 1:34500471‑M1/1‑68 (MQ=255) ACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATc > 1:29760595‑M1/1‑68 (MQ=255) ACCGGCTGGTGGGGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATc > 1:32136705‑M1/1‑68 (MQ=255) cTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCg < 1:33783475/67‑1 (MQ=255) cTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCg < 1:1194477/67‑1 (MQ=255) cTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCg < 1:7447676/67‑1 (MQ=255) cTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCg < 1:28873220/67‑1 (MQ=255) cTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCg < 1:11771774/67‑1 (MQ=255) tggtggTGCGTTTTCCAGATAGCCCTTTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCgg < 1:2832778/67‑1 (MQ=255) tggtggTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGa > 1:12153035/1‑68 (MQ=255) tggtggTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGa < 1:15254202/68‑1 (MQ=255) tggtggTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGa < 1:30071464/68‑1 (MQ=255) cggtggtGCGTTTTCCAGATAGCCCTTTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCgg < 1:2787318/66‑1 (MQ=255) gtggtgCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATc > 1:9409661/1‑68 (MQ=255) ggtgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCgg > 1:38204660‑M2/12‑68 (MQ=255) ggtgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCgg > 1:15564637‑M2/12‑68 (MQ=255) ggtgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCg < 1:35959497‑M2/56‑1 (MQ=255) tgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCggg < 1:34776182‑M2/58‑1 (MQ=255) tgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCggg < 1:32667373‑M2/58‑1 (MQ=255) tgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCggg < 1:18038163‑M2/58‑1 (MQ=255) tgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCggg < 1:5480815‑M2/58‑1 (MQ=255) tgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCggg < 1:5750206‑M2/58‑1 (MQ=255) tgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCggg < 1:13715660‑M2/58‑1 (MQ=255) gcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGc < 1:36203546‑M2/59‑1 (MQ=255) cgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGa > 1:12793401‑M2/8‑68 (MQ=255) gttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCCCCGGATCGGGCGa > 1:19272843‑M2/7‑67 (MQ=255) gttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGa > 1:3875093‑M2/7‑67 (MQ=255) gttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGAt < 1:11267157‑M2/62‑1 (MQ=255) tttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATc < 1:25169346‑M2/63‑1 (MQ=255) tttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCa < 1:19831613‑M2/64‑1 (MQ=255) tcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCAcc < 1:35576756‑M2/66‑1 (MQ=255) tcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCAcc < 1:33174960‑M2/66‑1 (MQ=255) tcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCAcc < 1:27432054‑M2/66‑1 (MQ=255) cCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCAcc > 1:36697768‑M2/2‑67 (MQ=255) | TTTTGCTGCGGCTTCTTTCACAGCAAAACGCTTCGCCAGAAAACGCACCGGCTGGTGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCGC > CP009273/2694172‑2694306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |