| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248303 | 118 (0.330) | 36 (0.120) | 9/96 | NT | 21.7% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | = 248351 | 159 (0.530) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 126 total aligned reads displayed.
TGATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/248229‑248303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggcGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < CP009273/248351‑248286 TGATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGG < 1:20197310/68‑1 ATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCCGGCGCCCGTCGGGCC > 1:21433811/1‑68 ATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCC > 1:5894151/1‑68 ATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCC > 1:18928663/1‑68 GCTCGCCAGGGGGTGAAATTAAAGTTCGCCGATTTTCAGCAAACCCCCCAGGCGCCCGTCTGGCCGCG > 1:14598528/1‑68 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG < 1:25593754/68‑1 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG < 1:21404276/68‑1 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG < 1:13261210/68‑1 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG < 1:22419347/68‑1 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG < 1:24635800/68‑1 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:10899539/1‑68 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG < 1:26695560/68‑1 GCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:16653713/1‑68 CTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:19339190/1‑67 CTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:7678614/1‑67 CTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:14981343/1‑67 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:27519576/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:19300023/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:2838171/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:29236332/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:5299281/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:21100934/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:11851199/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:26653716/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:10452738/68‑1 TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:26880959/68‑1 CGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:15775242/1‑65 CGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCG > 1:29079150/1‑65 AGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCGTTCAGCCCAGGGTTTACGC > 1:25630004/1‑68 GACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGT < 1:10090477/68‑1 TTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCGGTCATCCCAGGTTTTACGCGCGGGGGCGAT > 1:18345743/1‑68 GCAAACCACCCAGGAGCACGTCTGGCCGCGGCGGTGCTCCCAGGTTTTACGCGCGGTGGCGATTAGA > 1:14308026/1‑67 CCAGGAGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTtt > 1:23034298/1‑66 CAGGAGCACGTCTGGCCGCGGCGTTCATCCCCGGTTTTACGCGCGGTGGCGATTAGCTCAGCTTTAT > 1:10016088/1‑67 GGAGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTTCGCGGGGTGGCGATTAGATCAGCTTTATTCA > 1:11375538/1‑68 GGAGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCA > 1:27391610/1‑68 GGAGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCA > 1:13241026/1‑68 GGAGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATAAGCTTTATTCA > 1:13272497/1‑68 GGAGCACGTCTGGCCGCGGCGGTCATCCCAGGGTTTACGCGCGGTGGCGATTAGATCAGGTTTATTCA > 1:7194504/1‑68 AGCACGTCTGGCCGCGGGGTTCATCCCAGGTGTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:9135301/1‑67 AGCACGTCTGGCCGCGGCGTTCCTCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:16609107/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCCGGGTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:15660571/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGCGGAGATCAGCTTTAGTCcg > 1:22150714/1‑65 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTTGATCAGCGTTATTCAG > 1:5859499/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATGAGCTTTATTCAG > 1:19299926/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:10759528/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:4550677/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:7773492/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:12734899/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:28055967/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:3979253/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:25165530/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:23922210/1‑67 AGCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:13063639/1‑67 AGCACGTCTGGCCGCGGCGTTCAGCCCAGGGTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:5892239/1‑67 AGCACGTCTGGCCGCGGCGGTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCcg > 1:14939182/1‑65 GCACGTCTGGCCGCGGCGTTGATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:592679/1‑68 GCACGTCTGGCCGCGGCGTTCCTCCCAGGTTTTACGCGCGGGGGCGATTTGCTCAGCTTTATGCCGCC > 1:27316784/1‑68 GCACGTCTGGCCGCGGCGTTCATCCCAGGTTTTACGCCCGGTGGCGATTAGATCAGCGTTATTCAGCC > 1:1011615/1‑68 GCACGTCTGGCCGCGGCGGTCATGCCAGGTTTTACGCGCGGTGGCGAGTTGCTCAGCTTTATTCCGCC > 1:15535399/1‑68 TCTGGCCGCGGCGTTCATACCATGTTTTACGCGCGGTGGCGAGAAGATCAGCTTTATTCAGCCGCGG > 1:2678736/1‑67 GCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGA < 1:23983471/68‑1 GCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGA < 1:2245407/68‑1 GCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGA < 1:695719/68‑1 GCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGA < 1:16863059/68‑1 CCGCGGCGTTCGTCCCAGGTTTTACGCGCGGTGGCGATTAGCTCAGCTTTATTACGCCGCGGCCAGAC > 1:20978179/1‑68 CCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGAC > 1:14491907/1‑68 CCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGAC > 1:20439427/1‑68 CCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGAC > 1:7388232/1‑68 CGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGTTTAGATCAGCTTTATTCAGCCGCGGCCAGACG < 1:13158353/68‑1 CGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGAC < 1:9948797/67‑1 GCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGT > 1:17430284/1‑68 GCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGT > 1:17463497/1‑68 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGC < 1:15048002/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGC < 1:16359836/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGC < 1:1716588/68‑1 GCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGC > 1:18939237/1‑67 GCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGC > 1:3427672/1‑67 CGTTCTTGCCAGGTTTTACGCGCGGTGGCGATTTGATCAGCTTTATTCTGCCGCGGCCTGACGTGCT < 1:4441713/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTGGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:28608641/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTCCATCAGCTTTATCCAGCCGCGGCCAGACGTGCT < 1:6514322/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:16358552/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:10088813/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:9886717/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:9370144/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:11030322/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:8796686/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:13692923/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:22019134/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:15129414/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:16006752/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:16331193/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:16675100/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:28948746/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:17302673/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:5091077/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:4927441/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:1831692/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:17711398/67‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < 1:393732/67‑1 TGATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/248229‑248303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggcGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCCAGACGTGCT < CP009273/248351‑248286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |