| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248303 | 118 (0.330) | 36 (0.120) | 9/96 | NT | 21.7% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | = 248351 | 159 (0.530) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 417 total aligned reads displayed.
TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTG > CP009273/248236‑248369 | tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:9556252‑M1/8‑1 (MQ=255)tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:8743968‑M1/8‑1 (MQ=255)tCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:27519576‑M1/68‑1 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:17920352/1‑68 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:22645739/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:27842874/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:8414530/67‑1 (MQ=255) aGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAAt > 1:26639213/1‑68 (MQ=255) ggggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaa > 1:23218362/1‑68 (MQ=255) ggggAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:28628200/64‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:11916644/67‑1 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:10496335/1‑66 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAg < 1:9337669/67‑1 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAg < 1:25221719/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa < 1:25033708/67‑1 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt < 1:12099836/68‑1 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt < 1:20924185/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:28096887/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:17550238/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:16597989/68‑1 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:5891278/1‑68 (MQ=255) gaTTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgc > 1:8014036/1‑68 (MQ=255) gcagccccaccagacgcacaccgcgcccGCCGCGGCGGATTAAAGCTGCGCTGATCGCCGCCGCGCGt < 1:12732273‑M1/40‑1 (MQ=255) aGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:21430460/1‑68 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:3734262/1‑67 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:5612334/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:7356943/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:25565561/68‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:24650021/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg > 1:18811111/1‑68 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:4845866/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:13638169/68‑1 (MQ=255) ccAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATg > 1:14176636/1‑68 (MQ=255) cgcacaccgcgcccGCCGCGGCGGAATAAAGCTGATCTAATCGCCCCCGCGCGGAACACCGGGGATGa < 1:19380067‑M1/54‑1 (MQ=255) cAGGAGCACGTCTGGCCGCGGCgttcatccccggttttacgcgcggtggcgattagctcagctttat > 1:10016088‑M1/1‑22 (MQ=255) cAGGAGCACGTCTGGCCGCGGCGGAATAACGCTGCTCTAATCGCCACCGCGGGTAAAACCTGGGa < 1:26199325/65‑1 (MQ=255) ggAGCACGTCTGGCCGCGGCgttcatcccaggtttttcgcggggtggcgattagatcagctttattca > 1:11375538‑M1/1‑20 (MQ=255) ggAGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagataagctttattca > 1:13272497‑M1/1‑20 (MQ=255) aGCACGTCTGGCCGCGGCgttcatccccgggtttacgcgcggtggcgattagatcagctttattcag > 1:15660571‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:13063639‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:10759528‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCggtcatcccaggttttacgcgcggtggcgattagatcagctttattccg > 1:14939182‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:393732‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:9886717‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:7460068‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:22019134‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:21079590‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:16675100‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:17124133‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:15129414‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:17302673‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:13692923‑M2/67‑2 (MQ=255) gCACGTCTGGCCGCGGCgttcatcccaggttttacgcccggtggcgattagatcagcgttattcagcc > 1:1011615‑M1/1‑17 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:3197156‑M2/68‑4 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgc > 1:3427672‑M2/1‑65 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgc > 1:18939237‑M2/1‑65 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAACCCTGGGATGAAcgcc < 1:23906426‑M1/59‑1 (MQ=255) aCGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgc > 1:17430284‑M2/1‑63 (MQ=255) cGTCTGGCCGCGGCTGAATAAAGCTGATCTAAACGCCACCGCGCGTAAAACCTGGGATGAACgccgcg < 1:13158353‑M2/68‑7 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:20439427‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGACGAACgccgcgg > 1:15426124‑M2/1‑61 (MQ=255) tCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggc < 1:695719‑M2/68‑9 (MQ=255) tCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggc < 1:23983471‑M2/68‑9 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:7764352/68‑1 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:16863059‑M1/68‑61 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:2245407‑M1/68‑61 (MQ=255) ccGCGGCgttcatcccaggttttacgcgcggtggtgattagatcagctttattcagccgcggccagac > 1:23634962‑M1/1‑7 (MQ=255) ccGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagac > 1:14491907‑M1/1‑7 (MQ=255) ccGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagac > 1:20053809‑M1/1‑7 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:19289928‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:6456164‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:3982080‑M1/67‑1 (MQ=255) CGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGgcgc < 1:22120392‑M1/68‑1 (MQ=255) GCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGcgcg < 1:25832769‑M1/68‑1 (MQ=255) ggcgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgc < 1:16359836‑M1/68‑66 (MQ=255) ggcggcATAAAGCTGAGCAAATCGCCCCCGCGCGTAAAACCTGGGAGGAACgccgcggccagacgtgc > 1:27316784‑M2/1‑51 (MQ=255) ggCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATCAACgccgcggccagacgtgc > 1:592679‑M2/1‑51 (MQ=255) ggCGGAATAAAGCTGAGCAACTCGCCACCGCGCGTAAAACCTGGCATGACCgccgcggccagacgtgc > 1:15535399‑M2/1‑51 (MQ=255) GGCTGAATAAAGCTGATCTCATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:8936071‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCgg > 1:2965101‑M1/1‑67 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCgg > 1:12382399‑M1/1‑67 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:23466654‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:10404853‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:18574839‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:18305262‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:7852989‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:26886561‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:28486641‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:6370660‑M1/1‑68 (MQ=255) cgttcttgccaggttttacgcgcggtggcgatttgatcagctttattctgccgcggcctgacgtgct < 1:4441713‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattccatcagctttatccagccgcggccagacgtgct < 1:6514322‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:5091077‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:15800916‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:11030322‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:9370144‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:16006752‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:16331193‑M1/67‑67 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAACACCTGGGATGAACcccgcggccagacgtgct > 1:9135301‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:26728848‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:4550677‑M2/1‑49 (MQ=255) | TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTG > CP009273/248236‑248369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |