| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 818337 = | 432 (1.220) | 18 (0.060) | 5/98 | NT | 5.2% | coding (859/1242 nt) | clsB | cardiolipin synthase 2 |
| ? | CP009273 | 818368 = | 276 (0.890) | coding (828/1242 nt) | clsB | cardiolipin synthase 2 | |||||
TGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/818410‑818337‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGA > CP009273/818368‑818434 TGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:2518217/1‑68TGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:24909547/1‑68TGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:21135898/1‑68TGTCAGAGTCGGTGCACGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:18045044/1‑68 GTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:6478577/1‑67 GTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:15716432/1‑67 GTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACC > 1:28283465/1‑67 CAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGC < 1:3212632/67‑1 CAGAGTCGGTGCGCGCGTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGC < 1:10137826/67‑1 CAGAGTCGGGGCGCGCTTGCTGTATAACTATCTGGCTAAAGGCGGCGTTCAGGTTTTTGAGTACCGC < 1:15164688/67‑1 CAGAGGCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCC < 1:10505610/68‑1 AGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCC > 1:19978639/1‑67 AGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCC > 1:22179414/1‑67 GAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCG > 1:12889757/1‑67 AGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:9434972/1‑68 AGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:1562793/1‑68 AGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:25851366/1‑68 AGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:8694331/1‑68 GTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:7781891/1‑67 GTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:21506004/1‑67 GTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:8568828/1‑67 GTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC < 1:25338190/67‑1 GTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:28462035/1‑67 GTCGGTGCGAGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC > 1:5598859/1‑67 TCGCTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTTCCGCCGCCc > 1:15745740/1‑66 GCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACC < 1:12740930/68‑1 GCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGA < 1:2825141/67‑1 GCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGA < 1:14764751/67‑1 TTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATA < 1:25625416/67‑1 TTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATA < 1:25256400/67‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:22467977/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:25453424/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:12002349/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:6259428/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:19242328/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:19149635/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:1654640/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:15025052/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:14469509/68‑1 TGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGGTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:28614721/68‑1 TGCTGAATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGT < 1:19539317/68‑1 ATAACTATCTGGTTAAAGGCGGCGCTCAGGTTTTTGAGTACCGCCGCCTTTAACCAGATAGTTATACA < 1:24719586/68‑1 ATAACACTCTGGGTAAAGGCGGCGGTCAGGGTTTTGAGTACCGGCGCCTTTAACCAGATAGTTATACA < 1:9615984/68‑1 CGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCG < 1:7223535/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:27172357/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:27930549/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:4219575/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:24366091/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:24272822/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:22702356/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:8276382/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:20077064/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:8733034/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:16323895/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:13971453/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC < 1:13505439/68‑1 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCG > 1:5374405/1‑67 GCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCG > 1:18641517/1‑67 GCCGCCGTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATCTCCGGTTCGC < 1:10926048/68‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:6322516/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:9246002/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:5189420/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:9887863/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:4339592/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:26566001/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:26531824/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:26505758/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:11597558/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:13037918/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:21367454/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:20472897/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:13927213/67‑1 CGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCC < 1:17670522/67‑1 GCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGC > 1:1952302/1‑65 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGA < 1:5510717/68‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGA < 1:21293686/68‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTG < 1:10154946/67‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTG < 1:17482825/67‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTG < 1:8650357/67‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTG < 1:25572573/67‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTG < 1:2583480/67‑1 CTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTG < 1:3211109/67‑1 TGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/818410‑818337‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGA > CP009273/818368‑818434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |