| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 818337 = | 432 (1.220) | 18 (0.060) | 5/98 | NT | 5.2% | coding (859/1242 nt) | clsB | cardiolipin synthase 2 |
| ? | CP009273 | 818368 = | 276 (0.890) | coding (828/1242 nt) | clsB | cardiolipin synthase 2 | |||||
Only 100 of 416 total aligned reads displayed.
GATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGAA > CP009273/818301‑818435 | gATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCt < 1:20155/68‑1 (MQ=255)gATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCt > 1:23400859/1‑68 (MQ=255)gATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCt > 1:26049697/1‑68 (MQ=255) cGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa < 1:18226417/68‑1 (MQ=255) tCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTaa > 1:17471726/1‑67 (MQ=255) ccATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAcc < 1:10757507/68‑1 (MQ=255) ccATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAcc < 1:12031983/68‑1 (MQ=255) ccATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAcc < 1:6064706/68‑1 (MQ=255) ccATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAc < 1:19163763/67‑1 (MQ=255) aTCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAg > 1:15133507/1‑68 (MQ=255) tCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa < 1:11144097/68‑1 (MQ=255) tCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa > 1:7979450/1‑68 (MQ=255) tCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa < 1:12329160/68‑1 (MQ=255) tCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa < 1:20728392/68‑1 (MQ=255) tCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa < 1:20889938/68‑1 (MQ=255) gcttgctgtataactatctggttaaaggcggcgttcaggtttttgagtaccgccgccTTTAACCAGa < 1:14764751‑M2/10‑1 (MQ=255) aaTGCCTCTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:14361707/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGTCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:8781795/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAATACCTGAACGCCGCCTTTAACCAGATa < 1:29044697/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAATACCTGAACGCCGCCTTTAACCAGATa < 1:20333146/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:5818854/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:1948119/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:1953956/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:7475300/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:7425671/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:6497144/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:1730058/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:23740916/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:27228708/68‑1 (MQ=255) aaTGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATa < 1:15212511/68‑1 (MQ=255) tgctgtataactatctggttaaaggcggcgttcaggtttttgagtaccgccgccTTTAACCAGATAGt < 1:14469509‑M2/14‑1 (MQ=255) tgctgtataactatctggttaaaggcggcgttcaggtttttgagtaccgccgccTTTAACCAGATAGt < 1:15025052‑M2/14‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:3848087/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:343647/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:10441216/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:9020766/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:1458559/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:18456358/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:1183307/68‑1 (MQ=255) tGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACCCAAAAACCTGAACGCCGCCTTTAACCAGATAGt < 1:13730955/68‑1 (MQ=255) gCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGtt < 1:16976398/68‑1 (MQ=255) gCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGtt > 1:4484366/1‑68 (MQ=255) gCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGtt < 1:22350159/68‑1 (MQ=255) aCTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTtat > 1:3193726/1‑67 (MQ=255) aCTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTtat > 1:28715835/1‑67 (MQ=255) tttGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACa > 1:19119206/1‑68 (MQ=255) tttGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACa < 1:21489057/68‑1 (MQ=255) ataactatctggttaaaggcggcgctcaggtttttgagtaccgccgccTTTAACCAGATAGTTATACa < 1:24719586‑M2/20‑1 (MQ=255) tGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGc > 1:27529185/1‑68 (MQ=255) gCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCa > 1:16761668/1‑68 (MQ=255) cGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAg < 1:2934199/68‑1 (MQ=255) ggttaaaGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcgcgc < 1:12740930‑M1/61‑1 (MQ=255) aGCGGGCGGCGGCGGTACTCAATAACCTGAAGGCCGCCTTTAACCAGATAGTGATACAGCAAgcgcgc > 1:5100030/1‑68 (MQ=255) aGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcgcgc > 1:11285029/1‑68 (MQ=255) aGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcgcgc > 1:23953586/1‑68 (MQ=255) aGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcgcgc > 1:9587109/1‑68 (MQ=255) aGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcgcgc > 1:16184167/1‑68 (MQ=255) gggcgtCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCa < 1:5360109/66‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:4754863/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:18856083/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:17726771/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:4312019/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:26844885/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:10122693/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:1321389/67‑1 (MQ=255) cggcggcggTACTCAAAAACCTGAACGCCGCCGTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:761254/67‑1 (MQ=255) cggcggcggTACTAAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa < 1:24673303/67‑1 (MQ=255) GGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCTCGCACCGAc > 1:5598859‑M1/1‑67 (MQ=255) GGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGAct > 1:9434972‑M1/1‑68 (MQ=255) GGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGAc < 1:25338190‑M1/67‑1 (MQ=255) GGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGActct > 1:19978639‑M1/1‑67 (MQ=255) GGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACa > 1:2518217‑M1/1‑68 (MQ=255) cTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCg < 1:15675895/68‑1 (MQ=255) cTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCg < 1:28367812/68‑1 (MQ=255) cTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCg < 1:18545211/68‑1 (MQ=255) tCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCgg < 1:9698144/68‑1 (MQ=255) aaaCCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCata < 1:27350548/68‑1 (MQ=255) aaaCCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCata < 1:13468179/68‑1 (MQ=255) aaCCTGAACGCCGCCTTTAACCAGATAGTTCTACAGCAAGCGCGCACCGACTCTGACAATCGGCatat < 1:8595365/68‑1 (MQ=255) aCCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCatat > 1:9102076/1‑67 (MQ=255) aCCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCatat > 1:22064704/1‑67 (MQ=255) cTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCg > 1:28251353/1‑68 (MQ=255) tGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCgg < 1:17974192/68‑1 (MQ=255) tGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCgg < 1:8193876/68‑1 (MQ=255) aCGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTc > 1:24129629/1‑68 (MQ=255) gccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGc < 1:24366091‑M2/62‑1 (MQ=255) gccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGc < 1:22702356‑M2/62‑1 (MQ=255) gccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGc < 1:16323895‑M2/62‑1 (MQ=255) gccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGc < 1:13971453‑M2/62‑1 (MQ=255) gccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGc < 1:27930549‑M2/62‑1 (MQ=255) gccgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGc < 1:4219575‑M2/62‑1 (MQ=255) cgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGcc < 1:13037918‑M2/63‑1 (MQ=255) cgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGcc < 1:6322516‑M2/63‑1 (MQ=255) cgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGcc < 1:11597558‑M2/63‑1 (MQ=255) cgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGcc < 1:26531824‑M2/63‑1 (MQ=255) cgccTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGcc < 1:21367454‑M2/63‑1 (MQ=255) cTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTg < 1:25572573‑M2/66‑1 (MQ=255) cTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTg < 1:2583480‑M2/66‑1 (MQ=255) cTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGa < 1:21293686‑M2/67‑1 (MQ=255) tttAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGaa < 1:28601396/68‑1 (MQ=255) | GATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTTCGCCCTGAA > CP009273/818301‑818435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |