| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1092949 = | NA (NA) | 11 (0.030) | 6/100 | NT | 16.6% | intergenic (+664/+72) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | CP009273 | 1093045 = | 62 (0.180) | noncoding (64/88 nt) | serX | tRNA‑Ser | |||||
Only 100 of 184 total aligned reads displayed.
AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGccccga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1093015‑1092949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC > CP009273/1093045‑1093116 acAGACGACCTCGTACGAAAGAACGGGCTTTTTTATCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:14010930/66‑1AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:8197467/68‑1AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:25000275/68‑1AAAGAACAGCTCGTACGACAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:10040547/68‑1 AAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC < 1:6393108/68‑1 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:19276971/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:15015696/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:8390616/1‑67 GAAGAGCTCGTACGAAAGTACGTGCTTTTTTTTAGTATATTGCACACACCGGGGGGATGAGAACCCCC > 1:26186283/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAAGCCCC > 1:16621956/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAAGCCCC > 1:5441099/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACCCCCCGGGGGGATGAGAAGCCCC > 1:8870144/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACGCCGGGGGGATGAGAAGCCCC > 1:4909687/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACCCCGGGGGGATGAGAAGCCCC > 1:6747159/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACCCCGGGGGGAGGAGAAGCCC > 1:765236/1‑67 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCac > 1:1197796/1‑65 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCa > 1:26611372/1‑67 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:20222344/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:21491761/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:21198975/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:2721572/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:20640972/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:6548718/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:4585544/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:22254580/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:3879107/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:3313148/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:23285227/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:23621968/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:23992032/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:24136878/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:28197242/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:24451306/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:24569881/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:25278000/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:27347636/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:14825835/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9283028/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:10693328/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9201986/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:11607666/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9113596/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:13652751/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:14366951/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:14416189/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:14630712/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:1005409/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:20062380/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:15180001/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:16823695/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:19356336/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:19091148/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:7201299/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:7591183/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:798258/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:16662942/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:16344814/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:15865358/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:1539354/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:15355395/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC > 1:12722802/1‑67 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:23784261/1‑66 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC > 1:15201432/1‑65 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTAGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:2736857/1‑68 GAAGAGCTCGTACGAAAGCACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:16973453/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:23204245/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:28360100/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:312353/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:23519930/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:21525928/1‑68 atAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:10207189/65‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTCTATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:29010297/68‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:12455553/68‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:20246347/68‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:21301390/67‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:9850507/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:11387404/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:8310070/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:15580397/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:2167578/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:28331896/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:23377326/67‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGAAGAGAAGCCCCG > 1:22992121/1‑67 ccCGAAAGTACGGGCTTTTTTTTCGTATATAGCCCCCACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:20430101/66‑1 ACGAAAGTACGGGCTTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAAGC < 1:22119873/54‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:22665497/67‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:17229974/67‑1 AAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGCCGTA < 1:28839499/67‑1 ACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGCCGTATACAC < 1:17848627/68‑1 GCTTTTTTTTCGTATATTGCCCACCCCGGGGGGATGAGAAGCCCCGATACGTTGCCGTATACACACT < 1:17913890/67‑1 TTTTTTTTCGTATATTCCCCCCCCCGGGGGGATGAGAAGCCCCGATACGTTGCCGTATACACACTTT < 1:15067235/67‑1 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT > 1:5220942/1‑68 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT < 1:17538152/68‑1 CCCGATACGTTGCCGTATACACACTTTCTAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATT > 1:11934731/1‑68 CCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATT < 1:6220520/68‑1 CCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTG > 1:26837827/1‑68 CCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTG < 1:25494466/68‑1 CGATTCGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGT < 1:24432969/68‑1 GATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC > 1:7239139/1‑68 GATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC < 1:4745565/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGccccga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1093015‑1092949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC > CP009273/1093045‑1093116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |