| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1823129 | 149 (0.420) | 10 (0.030) | 8/94 | NT | 6.9% | coding (863/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase |
| ? | CP009273 | = 1823150 | 144 (0.490) | coding (842/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase | |||||
TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1823054‑1823129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgcccGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGC < CP009273/1823150‑1823086 TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCC < 1:9759964/68‑1TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCC < 1:22441698/68‑1 TCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCT > 1:20689134/1‑67 CATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGC < 1:18680602/68‑1 CATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGC < 1:18244736/68‑1 ATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGATCAAGAAACGCATCGCCCTGC > 1:26822715/1‑67 ATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAACCGCATCGCCCTGC > 1:8589422/1‑67 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGC > 1:17325298/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCACCCAGCCGAGCAAGAAACGCATCGCCCTGCGCC > 1:14671381/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:6738849/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:19521231/1‑67 TGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGT > 1:11082931/1‑68 TGCCCGGCGTTAATCGCTGGCTGACGGCAAACAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGg > 1:9267917/1‑67 CCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTA > 1:22265523/1‑68 GTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATT > 1:18669192/1‑65 CGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCA < 1:19121299/67‑1 GGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG > 1:18033151/1‑68 CAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGt < 1:10487024/67‑2 GACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCG > 1:11974087/1‑68 AACGCATCGCCCTGCGCCCGCCGTTTATTGGTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCG > 1:25953446/1‑68 AACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCG > 1:11291975/1‑68 ACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCG > 1:11857584/1‑67 CGCATCGCCCTGCGCCCGCCGTTTATTGCGGAAAAGGGGGGCGCAGGGCGATGCGTGTCTTGCTCG > 1:5049555/1‑66 ATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGG > 1:28345696/1‑68 ATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGG > 1:24631133/1‑68 TCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGGTTCTTGCTCGTCTGGT > 1:24405086/1‑68 GCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTT > 1:14201925/1‑67 GCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTT > 1:6228378/1‑67 GCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTT > 1:7588801/1‑67 GCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTT > 1:8001056/1‑67 CCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTG > 1:11760286/1‑67 CCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTG > 1:23886199/1‑67 ccgGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:4468425/65‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCCGGGCGCTGCGTTTCTTGCTCGTCTGGTTGCC > 1:13258421/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:27044224/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:6982064/68‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:14517699/68‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:14537435/68‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:21234416/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:17767329/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:15955217/1‑68 CCTGCGCCCGCCGTGTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCGCGGCTGGTTGCC > 1:22665866/1‑68 TGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGT < 1:16977091/68‑1 TGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCG > 1:2867050/1‑67 TGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCG > 1:13764457/1‑67 GCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTC > 1:18836023/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:26770796/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:49568/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:26125461/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:7544067/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:24851597/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:12036425/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTC > 1:9157375/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:7472087/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:8379476/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:15609058/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:10763649/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA < 1:8369770/67‑1 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:4656464/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:4259561/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:27095509/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:18628135/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:9744140/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:19500059/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:12281932/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:23316494/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:22012930/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:10539647/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:15063359/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:17534558/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:22634477/1‑67 CCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGC < 1:1635746/67‑1 CCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGC < 1:26782466/67‑1 TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1823054‑1823129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgcccGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGC < CP009273/1823150‑1823086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |