New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3614222NA (NA)4 (0.010) 3/102 NT 100% coding (1671/4236 nt) rhsB Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor
?CP009273 = 3614373 0 (0.000)coding (1822/4236 nt) rhsB Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor

TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCgggca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3614157‑3614222
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTTTC  <  CP009273/3614373‑3614303
                                                                                                                                         
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:26988610/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:15374218/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:16960140/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:16989682/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:19524538/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:20860070/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:21510238/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:22635008/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:25054481/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:10721296/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:28970295/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:4284315/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:4416416/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:5669480/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:6133638/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:7168776/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:8521412/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:9823883/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:10106745/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:13782093/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:15327935/1‑68
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       <  1:14066780/68‑1
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGATATGTAACCCGTTATGACCATGACCGCTTCGG                                                                       >  1:19901879/1‑68
 ACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGG                                                                      <  1:4461756/68‑1
 ACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGG                                                                      <  1:14280120/68‑1
  CGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGC                                                                     <  1:1540376/68‑1
  CGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGC                                                                     >  1:11475557/1‑68
  CGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGC                                                                     >  1:22990433/1‑68
  CGGCCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGCCCATGACCGCTTCGGGC                                                                     >  1:8910795/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:27004896/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:15960331/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:22906779/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:12297607/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:2122158/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:8701113/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:9308861/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:974658/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCA                                                                    >  1:19508110/1‑68
   GGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACAATGACCGCTTCGGGCA                                                                    >  1:15082544/1‑68
                     ACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAATGACGGCGGTCAGGTCA                                                  <  1:3548145/68‑1
                              TCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAATGACGGCGGTCAGGTCACCGGCGAT                                          <  1:29189037/67‑1
                               CCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAATGACGGCGGTCAGGTCACCGGCGATGT                                        <  1:9183280/68‑1
                               CCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAATGACGGCGGTCAGGTCACCGGCGATGT                                        <  1:14538783/68‑1
                                                                   GGCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCT     <  1:7867104/67‑1
                                                                    GCAATGACGGCGGTGAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:5286228/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATCCCGCGTTTCATGGCCCTGCGTGTCTT    >  1:23710229/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:12733866/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:4391013/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:12560215/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:781443/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:12107999/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:12105948/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:26909935/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:15863933/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:8663526/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:9617920/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:15339697/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:13918887/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:19348238/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:14789787/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:188916/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:20105181/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:20164357/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:20174469/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:21034076/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:21101943/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:21102792/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:21489236/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:18717280/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:21895194/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:2258488/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:17600159/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:23269899/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:23518115/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:24276457/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    <  1:14053365/67‑1
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:26889505/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:18918516/1‑67
                                                                    GCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTT    >  1:15991874/1‑67
                                                                      AATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTTTC  <  1:7416293/67‑1
                                                                                                                                         
TACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCgggca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3614157‑3614222
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCAATGACGGCGGTCAGGTCACCGGCGATGTTGTATTCATACCGCGTTTCATGGCCCTGCGTGTCTTTC  <  CP009273/3614373‑3614303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.