| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4363150 | NA (NA) | 4 (0.010) | 3/96 | NT | NA | intergenic (+171/+32) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein |
| ? | CP009273 | = 4363154 | NA (NA) | intergenic (+175/+28) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein | |||||
TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4363077‑4363150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctggaGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < CP009273/4363154‑4363089 TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCGTGACCAACGATCACATTATCAGTCATTTCAG < 1:22722076/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:17480521/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:10912111/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:11512498/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:5503529/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:25538969/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:864516/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:20286533/68‑1 TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGG < 1:18295364/68‑1 TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGG < 1:16653879/68‑1 TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGG < 1:10456502/68‑1 TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGG < 1:18624181/68‑1 TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:19657282/1‑67 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:2942604/1‑65 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:21716111/1‑65 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:487597/1‑65 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:24972266/1‑65 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:18446150/1‑65 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:25059169/1‑65 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTG > 1:7945008/1‑68 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCT < 1:5343153/67‑1 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:22876652/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:936132/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:23820506/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:8896848/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:25305780/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:25999048/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:25999702/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:26169227/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:6571247/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:1311585/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:20934338/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:21248698/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:14855572/1‑68 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:6268086/67‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:3818926/67‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:6569271/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:26742068/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:27998125/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:19154355/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:21777682/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:21751961/66‑1 CATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGAGCCTTCCGGCCTGAAATGACTGATAACGT > 1:22567986/1‑68 CCAACGATCACGTTATCAGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCG > 1:1914479/1‑68 AGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGC > 1:8315746/1‑68 AGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGC > 1:7429983/1‑68 GGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAAC > 1:21787658/1‑67 GGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAAC > 1:19979826/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:9020889/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:21879345/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:18842405/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:18359549/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:16325615/1‑67 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:12031416/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:15163253/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:11541508/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:1745110/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:23274780/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:7050326/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:7135540/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:6119447/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:5700807/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:7825606/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:556539/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:11693035/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:1064848/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:26690646/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:5223540/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:4803890/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:4691928/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:13808839/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:2724519/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:26640388/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:8732715/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:15852003/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:16382441/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:2162923/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCATAAACG > 1:23649449/1‑66 CTGGAGCCATCCAGCCGGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:15967293/66‑1 GGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTT < 1:6105466/68‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:8784682/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < 1:9714314/67‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:779516/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:27291085/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:263469/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:2563871/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:22664405/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < 1:21668559/67‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:15240656/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCAAGCCGGATGCGGCGAAAACGCCTaa > 1:23936250/1‑65 TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4363077‑4363150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctggaGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < CP009273/4363154‑4363089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |