| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4363150 | NA (NA) | 4 (0.010) | 3/96 | NT | NA | intergenic (+171/+32) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein |
| ? | CP009273 | = 4363154 | NA (NA) | intergenic (+175/+28) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein | |||||
Only 100 of 437 total aligned reads displayed.
GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTG > CP009273/4363083‑4363217 | gCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:6571247‑M1/1‑68 (MQ=255) ccGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:3818926‑M1/67‑1 (MQ=255) cGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATg < 1:18894812/68‑1 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATgg < 1:27672021/68‑1 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATgg < 1:3533916/68‑1 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATgg < 1:1400998/68‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:23228187/67‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:26134988/67‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:5679583/67‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:779516‑M2/1‑66 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:263469‑M2/1‑66 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:8784682‑M2/1‑66 (MQ=255) aaGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtcc < 1:6105466‑M2/68‑4 (MQ=255) gCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:15163253‑M2/67‑6 (MQ=255) gCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:12031416‑M2/67‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagc > 1:18359549‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:13808839‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag > 1:1064848‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag > 1:15852003‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag > 1:16382441‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:11693035‑M2/66‑6 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCgta < 1:14507793/68‑3 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGcc < 1:5544960/68‑2 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:20467072/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:21965089/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:5929378/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:2282512/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:23007099/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:23537040/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:25987491/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa > 1:2842464/1‑68 (MQ=255) gccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt > 1:4262425/1‑68 (MQ=255) gccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt > 1:3047091/1‑68 (MQ=255) gcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc < 1:9110876/68‑1 (MQ=255) aTCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCaa > 1:2156813/1‑68 (MQ=255) ccGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAg < 1:22410008/68‑1 (MQ=255) ccGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAg < 1:15435846/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:25224599/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:28129348/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:4925743/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:714187/68‑1 (MQ=255) cATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATga > 1:6164006/1‑68 (MQ=255) cATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATga > 1:22143354/1‑68 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:18246946/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:14761331/68‑1 (MQ=255) ccAACTATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta < 1:18831840/68‑1 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:20795618/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta < 1:25352656/68‑1 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta < 1:24236616/68‑1 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta < 1:6941831/68‑1 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:7856009/1‑68 (MQ=255) gATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTc > 1:17022782/1‑67 (MQ=255) gATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg < 1:29218895/68‑1 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg > 1:8546870/1‑67 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg > 1:25650836/1‑67 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGAGTATTTCg > 1:24571056/1‑67 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATAAGCAAAGATGAGATTATTTCg > 1:13449460/1‑67 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt < 1:14304838/68‑1 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:27113535/1‑68 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt < 1:11115621/68‑1 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:16029046/1‑68 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:26935827/1‑68 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:10180220/1‑68 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt < 1:10488073/68‑1 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtgg < 1:3268244/67‑1 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:12606927/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:19115249/1‑68 (MQ=255) gTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGt > 1:707685/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:24424927/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:23752472/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:4071841/1‑68 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt < 1:26679069/67‑1 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGt < 1:19501757/66‑1 (MQ=255) cATTGCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt < 1:24821734/67‑1 (MQ=255) aTTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtttt > 1:20008443/1‑68 (MQ=255) ggCTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaac > 1:19979826‑M1/1‑7 (MQ=255) ggCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggt > 1:7395/1‑68 (MQ=255) ggCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggt > 1:13114224/1‑68 (MQ=255) gCTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg > 1:16325615‑M1/1‑6 (MQ=255) gCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtg > 1:21143095/1‑68 (MQ=255) gCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtg > 1:12876796/1‑68 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgc < 1:11541508‑M1/67‑63 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgc < 1:1745110‑M1/67‑63 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg > 1:26640388‑M1/1‑5 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg < 1:5223540‑M1/66‑62 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg > 1:4803890‑M1/1‑5 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg < 1:8732715‑M1/66‑62 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcataaacg > 1:23649449‑M1/1‑5 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:15789500/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:12486020/1‑68 (MQ=255) tGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg < 1:463991/67‑1 (MQ=255) tGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg < 1:7585642/67‑1 (MQ=255) tGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg < 1:21852482/67‑1 (MQ=255) tGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGa < 1:17599334/68‑1 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta > 1:27291085‑M1/1‑1 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta > 1:22664405‑M1/1‑1 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta < 1:21668559‑M1/67‑67 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta < 1:9714314‑M1/67‑67 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcaagccggatgcggcgaaaacgcctaa > 1:23936250‑M1/1‑1 (MQ=255) aTGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTg > 1:14934511/1‑68 (MQ=255) | GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTG > CP009273/4363083‑4363217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |