| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 248326 = | 158 (0.450) | 8 (0.030) | 5/96 | NT | 5.4% | coding (942/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | 248370 = | 143 (0.470) | coding (986/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 439 total aligned reads displayed.
TCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGA > CP009273/248259‑248393 | aatcccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcac < 1:554407‑M1/1‑1 (MQ=255) atcccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcac < 1:23973089‑M1/1‑1 (MQ=255) tcccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaca < 1:333284‑M1/2‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:9706785‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:6422451‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:13702988‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:19152183‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:3088358‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:8180420‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:1207409‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:27249540‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:25041538‑M1/4‑1 (MQ=255) cccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:26083681‑M1/4‑1 (MQ=255) cccagcaccagctgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:16249431‑M1/4‑1 (MQ=255) ccaagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:29231136‑M1/4‑1 (MQ=255) ccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCAcc < 1:9454960‑M1/4‑1 (MQ=255) ccagcaccagttgtctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcaCACcg > 1:26590990‑M1/64‑68 (MQ=255) gaTTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgc > 1:8014036/1‑68 (MQ=255) tttCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgcg < 1:13254078/68‑1 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:20871436/1‑67 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:9337482/1‑67 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:7356943/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:25565561/68‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:24650021/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:10508307/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:13638169/68‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg < 1:4845866/68‑1 (MQ=255) cagacgcacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTggg < 1:1123869‑M1/50‑1 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGa > 1:11509285/1‑68 (MQ=255) cacaccgcgcccGCCGCGGCTGAATAAAGCTGCTCTAATCGCCCCCGCGCGTAAAAGCTGGGATGAAc < 1:4026303‑M1/56‑1 (MQ=255) aGCACGTCTGGCCGCGGCTGGATAAAGCTGATGGAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:6514322‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:17302673‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:393732‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:11030322‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:22135835‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:13138121‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:25296871‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:16006752‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:28948746‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:21079590‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCCAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:28608641‑M2/67‑2 (MQ=255) aGCACGTCAGGCCGCGGCAGAATAAAGCTGATCAAATCGCCACCGCGCGTAAAACCTGGCAAGAACg < 1:4441713‑M2/67‑2 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:15048002‑M2/68‑4 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:16359836‑M2/68‑4 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgc > 1:18939237‑M2/1‑65 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATGTAATCGCCCCGGCGCGTAAAACGTGGGATGAAcgcc < 1:15229775‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:2367776‑M1/59‑1 (MQ=255) aCGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgc > 1:17463497‑M2/1‑63 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:20053809‑M2/1‑61 (MQ=255) tCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggc < 1:2245407‑M2/68‑9 (MQ=255) cccGCCGCGGCTGAATAAAGCTGATCAAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCgcggcg < 1:5968022‑M1/65‑1 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:23823618/68‑1 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:7764352/68‑1 (MQ=255) ccGCGGCTGAATAAAGCTGATCTTCTCGCCACCGCGCGTAAAACATGGTATGAACgccgcggccaga > 1:2678736‑M2/1‑55 (MQ=255) GCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGcgcg < 1:25832769‑M1/68‑1 (MQ=255) ggCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATCAACgccgcggccagacgtgc > 1:592679‑M2/1‑51 (MQ=255) ggCGGAATAAAGCTGAGCAACTCGCCACCGCGCGTAAAACCTGGCATGACCgccgcggccagacgtgc > 1:15535399‑M2/1‑51 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:10120420‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:27842455‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:28208136‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:23414700‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:18305262‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:12708552‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:14405451‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCAAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:16855031‑M1/1‑68 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAACACCTGGGATGAACcccgcggccagacgtgct > 1:9135301‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:10759528‑M2/1‑49 (MQ=255) cTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGAGGAACgccgcggccagacgtgct > 1:16609107‑M2/1‑49 (MQ=255) cTGAATAAAGCTCATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:19299926‑M2/1‑49 (MQ=255) tGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgctcc > 1:27391610‑M2/1‑48 (MQ=255) tGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgtgt > 1:18815640/1‑67 (MQ=255) tGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGtgtg < 1:1949464/68‑1 (MQ=255) tGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGtgtg < 1:7609368/68‑1 (MQ=255) gAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGc < 1:27625274/68‑1 (MQ=255) aTAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCg < 1:2058665/67‑1 (MQ=255) aTAAAGCTGAGCTAATCGCCACCGCGCGTAAAACCGGGGATGAACgccgcggccagacgtgctcctg > 1:10016088‑M2/1‑45 (MQ=255) aaGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCtg < 1:17971314/68‑1 (MQ=255) aGCTCCTCTAAACGCCCCCGCGCGTAAAACCTGGCAGGAACgccgcggccagacgtgctcctgggtgg > 1:5661409‑M2/1‑41 (MQ=255) gCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCtggt > 1:9861536/1‑68 (MQ=255) gCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCtggt > 1:8722700/1‑68 (MQ=255) gCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCtggt > 1:18378824/1‑68 (MQ=255) gCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCtggt > 1:18585167/1‑68 (MQ=255) gATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTggg < 1:8505098/68‑1 (MQ=255) gATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTggg < 1:12747231/68‑1 (MQ=255) tCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTggg < 1:17097288/66‑1 (MQ=255) tCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTggg > 1:21370549/1‑66 (MQ=255) tCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTggg > 1:7855659/1‑66 (MQ=255) tCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGc < 1:15796676/68‑1 (MQ=255) cTAATCGCCACCGCGCGTAAAACCAGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCt < 1:14112259/68‑1 (MQ=255) aaTCGCCACCGCGCGTAAAACCTGGGATGACCGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGc < 1:6810522/68‑1 (MQ=255) aaTCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGc < 1:14861145/68‑1 (MQ=255) aaTCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGc < 1:4567210/68‑1 (MQ=255) aaTCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGc < 1:2311524/68‑1 (MQ=255) tCGCCACCGCGCGTAAAACCTGGGATGAACGGCGCGGCGGGCGCGGTGTGCGGCTGGTGGGGCTGCAt > 1:5100609/1‑68 (MQ=255) tCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAt > 1:7122936/1‑68 (MQ=255) tCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAt < 1:3565277/68‑1 (MQ=255) tCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAt > 1:21834397/1‑68 (MQ=255) tCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAt > 1:12469567/1‑68 (MQ=255) tCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAt > 1:22925180/1‑68 (MQ=255) ccACCGCGCGTAAACCCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAtgtg > 1:26712465/1‑68 (MQ=255) | TCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGA > CP009273/248259‑248393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |