| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2458952 | 205 (0.580) | 11 (0.040) | 6/94 | NT | 5.7% | coding (173/933 nt) | yfdC | putative inner membrane protein |
| ? | CP009273 | = 2458965 | 191 (0.640) | coding (186/933 nt) | yfdC | putative inner membrane protein | |||||
Only 100 of 475 total aligned reads displayed.
CCGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATT > CP009273/2458884‑2459018 | cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:20361165‑M1/68‑1 (MQ=255) cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:7189824‑M1/68‑1 (MQ=255) cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:15354011‑M1/68‑1 (MQ=255) cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:2148955‑M1/68‑1 (MQ=255) cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:6134347‑M1/68‑1 (MQ=255) cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:27987074‑M1/68‑1 (MQ=255) cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:25847059‑M1/68‑1 (MQ=255) ggCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:950128‑M1/1‑66 (MQ=255) ggCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:2250087‑M1/1‑66 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt > 1:16707851/1‑67 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt > 1:18133931/1‑67 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:25281595/67‑1 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:26139403/67‑1 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt > 1:6943849/1‑67 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:8672751/67‑1 (MQ=255) cGATGGCAATTCATGAGCAAATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:11709754/67‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:29082131/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:8164111/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:19644611/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:23435942/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:10426519/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:13780101/68‑1 (MQ=255) ggCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACtgt < 1:12918873/68‑1 (MQ=255) gCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACtgtg > 1:15937577/1‑68 (MQ=255) aaTTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTgg < 1:28707412/67‑1 (MQ=255) aaTTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTgg < 1:21176765/67‑1 (MQ=255) aaTTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTgg < 1:4123991/67‑1 (MQ=255) aaTTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTgg < 1:5713892/67‑1 (MQ=255) ttCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa > 1:3630043/1‑68 (MQ=255) ttCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa < 1:28318371/68‑1 (MQ=255) ttCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa < 1:22822581/68‑1 (MQ=255) tCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg > 1:18362583‑M2/1‑67 (MQ=255) cATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGGCGCAATGGGgggccacagtagcg > 1:24442614‑M1/1‑53 (MQ=255) cATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg < 1:13238407‑M2/67‑2 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:17880859‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:2369357‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:14927310‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:10576739‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGGCAgcc > 1:5155356‑M2/1‑65 (MQ=255) tGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcca > 1:22996168‑M2/1‑64 (MQ=255) tGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcca < 1:21889747‑M2/68‑5 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:2503994‑M2/68‑7 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:15461763‑M2/68‑7 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:18904960‑M2/68‑7 (MQ=255) cATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgc < 1:5558659‑M2/68‑9 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGCCGCAATGGCgggccccagtagcgcccttggg > 1:3357282‑M1/1‑46 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgc > 1:20406761‑M2/1‑59 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgc > 1:18522919‑M2/1‑59 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGGCAgccattgcg > 1:25440191‑M2/1‑59 (MQ=255) ccGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGcggcgg > 1:17728233/1‑68 (MQ=255) ccGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGcggcgg > 1:15722356/1‑68 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTGGAACGCGCCGCAATGGCtgaccacagtagcgccattgcgtcgcg > 1:5862472‑M1/1‑41 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg < 1:6416463/68‑1 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg < 1:27840196/68‑1 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTGGAACCCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg < 1:15915352/68‑1 (MQ=255) gCCAGGATTGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:10065725/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGCCGCAATGGCGCGACTGGGGGCAGCCATTGCGGCGGGt < 1:2659465/68‑1 (MQ=255) ccAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCtggccaccgtagcgccagtgcgtcgcgtt > 1:27478844‑M1/1‑39 (MQ=255) aGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:4366002/1‑64 (MQ=255) gATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTc > 1:12301053/1‑68 (MQ=255) gATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTc > 1:16428230/1‑68 (MQ=255) aTGGTTAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:11102344/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:24232456/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:6647/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTc < 1:9052093/67‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:15149675/1‑68 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:23844494/1‑68 (MQ=255) tGGTGAAAAAGAGCGGGAACGCGACGCAATGGCGCTACGGTGGGCAgccattgcggcgcgttccagc > 1:21308787‑M2/1‑46 (MQ=255) aaaaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGgcg < 1:303604/68‑1 (MQ=255) aaaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGgc > 1:23316502/1‑66 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:18768812/1‑67 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:20903113/1‑67 (MQ=255) gagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTc > 1:19954725/1‑68 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:26972404/1‑68 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:19239644/1‑68 (MQ=255) cgcgACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGc > 1:2229261/1‑68 (MQ=255) cccgccgcaaTGGCGCTACTGTGGTCAgccattgcggcgcgttccagctctttttcaccatcctggcg < 1:19112040‑M2/66‑42 (MQ=255) cccaaTGGCGCTACTGGGGGCAcccattgcgtcgcgttccagctctttttcaccatcctggcggatat > 1:25097792‑M2/3‑22 (MQ=255) cGCAATGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatat > 1:24998674‑M1/1‑9 (MQ=255) cGCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAg < 1:17040165/68‑1 (MQ=255) gCAATGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatg < 1:24900235‑M1/68‑61 (MQ=255) gCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:8926102/68‑1 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgct < 1:11524213‑M1/68‑63 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgct < 1:24088995‑M1/68‑63 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgct < 1:430620‑M1/68‑63 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:22940626‑M1/67‑62 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:16247077‑M1/67‑62 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:19082879‑M1/67‑62 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:2632114‑M1/67‑62 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:25735892‑M1/67‑62 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:5418782/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:9335814/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:756411/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGa < 1:14202464/68‑1 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:175329‑M1/1‑3 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat > 1:10206837/1‑68 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat > 1:2891091/1‑68 (MQ=255) ggCGCGACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCGTCGTTAGTGGCAAAAGGGatat > 1:28174235/1‑68 (MQ=255) ctgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcatg < 1:6240847‑M1/67‑67 (MQ=255) ctgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcatg < 1:14776855‑M1/67‑67 (MQ=255) | CCGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATT > CP009273/2458884‑2459018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |