| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2458952 | 205 (0.580) | 11 (0.040) | 6/94 | NT | 5.7% | coding (173/933 nt) | yfdC | putative inner membrane protein |
| ? | CP009273 | = 2458965 | 191 (0.640) | coding (186/933 nt) | yfdC | putative inner membrane protein | |||||
Only 100 of 397 total aligned reads displayed.
TTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTGG > CP009273/2458898‑2459032 | ttCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa < 1:5278179/68‑1 (MQ=255) tCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg > 1:18362583‑M2/1‑67 (MQ=255) cATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg < 1:6240847‑M2/67‑2 (MQ=255) cATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg < 1:13238407‑M2/67‑2 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:17880859‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:21674224‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:2369357‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGAGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:614066‑M2/1‑65 (MQ=255) tGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGACCGCGACGCAATGGCGCTACTGTGGTCAgcca < 1:8782162‑M2/68‑5 (MQ=255) tGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcca > 1:22996168‑M2/1‑64 (MQ=255) gAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccat > 1:22885592‑M2/1‑63 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:27238042‑M2/67‑7 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:15761292‑M2/67‑7 (MQ=255) cATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgc < 1:5558659‑M2/68‑9 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgcg < 1:18580389‑M2/68‑10 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgcg < 1:25066445‑M2/68‑10 (MQ=255) tCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTgcggcg > 1:24102954/1‑68 (MQ=255) ccGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGcggcgg > 1:1036343/1‑68 (MQ=255) ccGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGcggcgg < 1:1499100/68‑1 (MQ=255) ccGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGcggcgg < 1:16537429/68‑1 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg < 1:26238775/68‑1 (MQ=255) gCCAGGATTGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:10065725/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:6436228/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:24386473/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:3300341/68‑1 (MQ=255) gCCAGGATGGGGAAAAAGCGCTGGCACGCGACGCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGt < 1:4211171/68‑1 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCGGCCATTGCGGCggg > 1:6876603/1‑65 (MQ=255) ggATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:27623280/1‑63 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:6647/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:19009481/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:954514/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:10606050/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:1086570/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:16100648/1‑68 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:28008365/1‑68 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:28212211/1‑68 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:26570415/1‑68 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:15149675/1‑68 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:15296316/1‑68 (MQ=255) tGGTGAAAAAGAGCGGGAACGCGACGCAATGGCGCTACGGTGGGCAgccattgcggcgcgttccagc > 1:21308787‑M2/1‑46 (MQ=255) aaaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGgc > 1:23316502/1‑66 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:25824309/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:24928286/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:23907385/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:15473742/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:14693884/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:25239080/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:16377914/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:8121531/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:16888271/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:27861354/68‑1 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:3517422/1‑67 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:20903113/1‑67 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:18855997/1‑67 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:11341606/1‑67 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:26781903/1‑67 (MQ=255) tGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGt < 1:24737279/66‑1 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:5695945/1‑68 (MQ=255) aCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTgg < 1:7225113/68‑1 (MQ=255) aCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTgg < 1:19172523/68‑1 (MQ=255) cgcgACGCAATGGCGCTACTGTGGTCAgccattgcggcgcgttccagctctttttcaccatcctggcg > 1:5862472‑M2/1‑27 (MQ=255) gCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:2113282/68‑1 (MQ=255) gCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:13856382/68‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:1153504/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:19247382/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:7787663/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:9335814/67‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:12848907/68‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat > 1:10206837/1‑68 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:4697635/68‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat > 1:2891091/1‑68 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:9000765/68‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat > 1:14287029/1‑68 (MQ=255) gcgcTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATAtt > 1:29022548/1‑68 (MQ=255) gcTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTc > 1:20481713/1‑68 (MQ=255) gcTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTc > 1:12008549/1‑68 (MQ=255) tACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGTGATATTTCaa > 1:26613659/1‑68 (MQ=255) cTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAg > 1:28587691/1‑67 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTc > 1:3662855/1‑68 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTc > 1:13106125/1‑68 (MQ=255) gggcAGCCATGGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:4093199/64‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGaa < 1:23448449/68‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:12444517/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:17050187/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:19904344/1‑67 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:1411712/67‑1 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:22427802/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:11648399/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:4975678/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:20378836/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:9124393/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:17659356/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:19662931/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:13713847/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:18736728/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAAc < 1:22053064/67‑1 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAAc < 1:25461237/67‑1 (MQ=255) cAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTg > 1:1744375/1‑68 (MQ=255) aGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTgg > 1:1799230/1‑68 (MQ=255) aGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTg < 1:20127722/67‑1 (MQ=255) | TTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTGG > CP009273/2458898‑2459032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |