| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3832491 = | 316 (0.900) | 16 (0.050) | 5/96 | NT | 6.9% | coding (884/924 nt) | yicL | EamA family inner membrane putative transporter |
| ? | CP009273 | 3832524 = | 162 (0.540) | coding (917/924 nt) | yicL | EamA family inner membrane putative transporter | |||||
Only 100 of 426 total aligned reads displayed.
TACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACC > CP009273/3832425‑3832558 | agtcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatg < 1:11813429‑M1/1‑1 (MQ=255) aCCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:13462215/1‑68 (MQ=255) tcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGcc < 1:19868871‑M1/3‑1 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:17597184/1‑67 (MQ=255) cgctaaagcggcagaaaccatttttcacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:14440184‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:2246949‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:17427104‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:17858490‑M1/64‑68 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:1725858/1‑67 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:11447169/1‑67 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:27937035/1‑67 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:28682005/1‑67 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:5233644/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:6943561/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:5751317/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:724363/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:7882797/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:21809303/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:22807402/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:4822726/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTACCGTCGCCGCGcc > 1:16557561/1‑68 (MQ=255) tggctggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAg > 1:2386330/1‑68 (MQ=255) ggctggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGa < 1:17096494/68‑1 (MQ=255) ggctggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGa < 1:22568955/68‑1 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaa > 1:14870998/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaa > 1:25506523/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:1700321/67‑1 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:11981926/67‑1 (MQ=255) gggAACGCTGCTGATTCTGTCATCGGTGATTCTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaaa < 1:20505489/68‑1 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:28450900/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:24232605/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:10090825/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:21581826/1‑68 (MQ=255) cGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataaat < 1:5481569/68‑1 (MQ=255) cGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataaa > 1:18407412/1‑67 (MQ=255) tgctgATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGt < 1:20873073/68‑1 (MQ=255) gctgATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGt > 1:19977701/1‑67 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:2407258/1‑67 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:7941260/1‑67 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg < 1:928240/68‑1 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg < 1:1963548/68‑1 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg < 1:22259261/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:7069157/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:941287/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:25749117/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:21898515/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:21166043/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:29182409/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:26738507/68‑1 (MQ=255) tCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATaa > 1:410753/1‑68 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:7605809/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:15617715/68‑1 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:5094860/1‑68 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:8207592/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:11313168/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTga < 1:19192514/67‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:10994178/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:18044587/68‑1 (MQ=255) tgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt > 1:9564945/1‑67 (MQ=255) tgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt > 1:23151469/1‑67 (MQ=255) tgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt > 1:14648113/1‑67 (MQ=255) gctggtaattctcacttatGCCGCGCGAGAAATATAAATCGTCCGGCGCGGCATAAGTGAGAATTacg < 1:18737564‑M1/49‑2 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAc < 1:18951048‑M1/48‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca > 1:23513834/1‑68 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:16874911/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:3559204/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca > 1:3337331/1‑68 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:13296846/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:12891527/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:12762618/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:439847/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:22069657/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:24910238/68‑1 (MQ=255) tCAATGGATTCCCGGCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:8158283/68‑1 (MQ=255) ggATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc > 1:2343401/1‑68 (MQ=255) ggATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc < 1:15129555/68‑1 (MQ=255) ggATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc > 1:3122676/1‑68 (MQ=255) tctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc < 1:16383380‑M1/57‑1 (MQ=255) tctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc < 1:13171242‑M1/57‑1 (MQ=255) ctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCCGCCAGGCa < 1:23629335‑M1/58‑1 (MQ=255) ctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:16190552‑M1/58‑1 (MQ=255) aTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa > 1:8685936/1‑67 (MQ=255) aTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:19091973/67‑1 (MQ=255) ttCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc > 1:25823057/1‑68 (MQ=255) ttCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc < 1:21355370/68‑1 (MQ=255) tCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc > 1:6415114/1‑67 (MQ=255) cccGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc < 1:10398702/68‑1 (MQ=255) cccGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc < 1:14984499/68‑1 (MQ=255) cccGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc > 1:10780865/1‑68 (MQ=255) cccGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc > 1:6206933/1‑68 (MQ=255) cttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc < 1:8475902‑M1/62‑1 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCCCcgcg > 1:11632616/1‑67 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:26253433/1‑67 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:12379368/1‑67 (MQ=255) cgccgcGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAc < 1:28166485/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc > 1:15776128‑M1/1‑68 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:15994230‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:13933877‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:26426365‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:27248400‑M1/68‑1 (MQ=255) | TACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACC > CP009273/3832425‑3832558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |