| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3999963 | 455 (1.290) | 18 (0.060) | 8/98 | NT | 5.7% | coding (740/1830 nt) | recQ | ATP‑dependent DNA helicase |
| ? | CP009273 | = 4000007 | 195 (0.630) | coding (784/1830 nt) | recQ | ATP‑dependent DNA helicase | |||||
Only 100 of 601 total aligned reads displayed.
ATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGG > CP009273/3999897‑4000029 | cAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaa < 1:6529433/68‑1 (MQ=255) aGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa > 1:22810216/1‑68 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:12376672/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:8395237/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:14401152/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:20850772/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:26944610/67‑1 (MQ=255) gATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTag < 1:25665803/68‑1 (MQ=255) tGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaa > 1:14869575/1‑68 (MQ=255) tGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTaga < 1:7254310/67‑1 (MQ=255) gcgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag < 1:4983350/68‑1 (MQ=255) gcgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag < 1:12838684/68‑1 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:19098730/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:15277638/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:17420628/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:17884810/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:18032111/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:7776717/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:10944781/1‑67 (MQ=255) aCGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACAcc < 1:10020331/68‑1 (MQ=255) gTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACAcc > 1:21658191/1‑66 (MQ=255) tGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACAcc > 1:28248579/1‑65 (MQ=255) gCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCt < 1:8130851/67‑1 (MQ=255) cAGGAACAGCGCGGTAAGTCAGGGATTATCTACTGCAACAGCCGCGCGAAACTATAATCCACCGCTgc > 1:24467616/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:10822930/1‑68 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:26109807/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:21094336/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:25164696/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:26306732/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg < 1:27262826/67‑1 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:28088009/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:24038885/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:2983240/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:18926379/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:18361375/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:9508461/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:4368536/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:15927403/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:10628514/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:9223369/1‑67 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGGCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:5411044/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:27891253/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:2051845/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:2321477/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:8823516/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:21952059/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:12137574/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 1:28982798/68‑1 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 1:605183/68‑1 (MQ=255) cAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGccc > 1:23709795/1‑67 (MQ=255) cgcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCa > 1:15053971/1‑68 (MQ=255) gcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:7001979/64‑1 (MQ=255) gcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:2596996/64‑1 (MQ=255) gcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:4549028/64‑1 (MQ=255) gcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:10155939/64‑1 (MQ=255) ggTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCaaa < 1:759081/67‑1 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGc < 1:11532967/67‑1 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGc < 1:21292343/67‑1 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGc < 1:17041185/67‑1 (MQ=255) cAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGa > 1:21437024/1‑68 (MQ=255) aGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGaa > 1:19880750/1‑68 (MQ=255) cATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:14546300/1‑68 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcg < 1:11242197‑M2/68‑6 (MQ=255) cTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAACTAgcgcgg > 1:3937719‑M2/1‑62 (MQ=255) aCTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:13812275/1‑68 (MQ=255) aCTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:2759349/1‑68 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcggctg > 1:26431939‑M2/1‑59 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg < 1:20798976/68‑1 (MQ=255) tGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:5232360/1‑67 (MQ=255) tGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCggcggc < 1:15567399/68‑1 (MQ=255) gCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:13189113‑M1/1‑13 (MQ=255) gCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:3766965‑M1/1‑13 (MQ=255) gCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:18506015‑M1/1‑13 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcggctgtt > 1:24126886‑M2/1‑57 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:13666220/1‑66 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:22570821/1‑66 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:5740847/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:10449404/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:3341432/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:20667744/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:2028726/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:19390245/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa < 1:28778461/68‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:19517289/1‑68 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:14055617/1‑68 (MQ=255) aggccGCGCtaattcccttgcgttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgc < 1:739006‑M1/64‑58 (MQ=255) aGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCa > 1:12590478/1‑68 (MQ=255) aGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCa > 1:25433507/1‑68 (MQ=255) gCCGCGCtaattcccttgctttgcaggcgcgcagctgtgtcttctactttcgcgcggctgttgcagta < 1:21527496‑M1/68‑62 (MQ=255) gCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagta > 1:24859781‑M1/1‑7 (MQ=255) gCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagta > 1:16592710‑M1/1‑7 (MQ=255) gCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt > 1:1693087/1‑68 (MQ=255) ccGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt > 1:7539387/1‑67 (MQ=255) ccGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt > 1:11856825/1‑67 (MQ=255) cgcgcgAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcggctgttgcagt > 1:1610468‑M2/1‑49 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtaga < 1:3605413‑M1/68‑64 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtaga < 1:8593268‑M1/68‑64 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtaga < 1:23372322‑M1/68‑64 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtag < 1:22164379‑M1/67‑63 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtag < 1:28484629‑M1/67‑63 (MQ=255) | ATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGG > CP009273/3999897‑4000029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |