| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1405235 | NA (NA) | 3 (0.010) | 3/98 | NT | NA | intergenic (+94/+35) | dbpA/ttcA | ATP‑dependent RNA helicase, specific for 23S rRNA/tRNA 2‑thiocytidine biosynthesis protein |
| ? | CP009273 | = 1405259 | NA (NA) | intergenic (+118/+11) | dbpA/ttcA | ATP‑dependent RNA helicase, specific for 23S rRNA/tRNA 2‑thiocytidine biosynthesis protein | |||||
Only 100 of 596 total aligned reads displayed.
CGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCT > CP009273/1405192‑1405324 | cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:8055948‑M2/1‑68 (MQ=255)cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:18762499‑M2/1‑68 (MQ=255)cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC < 1:20059299‑M2/68‑1 (MQ=255)cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:2033495‑M2/1‑68 (MQ=255)cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:26173529‑M2/1‑68 (MQ=255) tGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCtact > 1:14959963‑M2/1‑64 (MQ=255) tGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCt < 1:15829537/67‑1 (MQ=255) gCGACGCTGGCCGCGTCTTTTCGGGCCTCCATAAGAGTAGCGCGTTTCGCTTGCGCATCGGGCGCTAt < 1:4283053/68‑1 (MQ=37) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:23999662/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:1990672/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:669018/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:26894399/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:29256467/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:25348342/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:2267909/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:4407963/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:10037356/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:12650074/68‑1 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:27794983/68‑1 (MQ=255) tGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGtt < 1:5941452/68‑1 (MQ=255) ccGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAtt > 1:7692383/1‑68 (MQ=255) ccGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAt < 1:21471116/67‑1 (MQ=255) gTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCtactcttatggaggccgg > 1:23489962‑M2/1‑49 (MQ=255) gTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCAc < 1:15267578/68‑1 (MQ=255) gTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCAc < 1:17563875/68‑1 (MQ=255) tCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACt > 1:19557696/1‑68 (MQ=255) cTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACtt < 1:24426341/68‑1 (MQ=255) tATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCa < 1:21971219/68‑1 (MQ=255) tCCGGCCTCCATAATAGTAGCCCGATACGCTTGCGCATCGTGCGCTATCCTGGTTATTTCACTTCAAc < 1:5050779/68‑1 (MQ=255) tCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCaa > 1:2584715/1‑67 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:23706268/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:1210481/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:3785393/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:1176721/1‑68 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:25548735/1‑68 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:1609805/1‑68 (MQ=255) cATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAg < 1:7053647/68‑1 (MQ=255) cATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAg < 1:10783124/68‑1 (MQ=255) cATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAg < 1:18473445/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:19385130/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:8538216/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:28508553/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:14201877/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:11427438/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:13630626/68‑1 (MQ=255) tAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGcc < 1:18186784/68‑1 (MQ=255) tAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGcc > 1:8677039/1‑68 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:22292292/1‑68 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:4122338/1‑68 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:29135145/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:27105482/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:11994490/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:26745520/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:27588412/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:28961876/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:15726131/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:25989800/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:13757701/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:6366893/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:3291467/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:25067165/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:8304465/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:17201709/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:4902884/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:21112905/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:21005448/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:20541266/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:9624093/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:13292786/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:4786817/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAATCAGCCGtt > 1:8894428/1‑66 (MQ=255) gTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa < 1:7519409/66‑1 (MQ=255) gTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa < 1:13450610/66‑1 (MQ=255) cccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa > 1:7845301/1‑67 (MQ=255) cccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa > 1:21796472/1‑67 (MQ=255) cccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa > 1:5181649/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAGCCACATTCAGCCGTAACTCAt > 1:17720741/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt > 1:12480063/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt > 1:7307391/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt > 1:142909/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt > 1:930249/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt > 1:5344314/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTACAACCACATTCAGCCGTAACTCAt > 1:16589890/1‑67 (MQ=255) tACGCTTGCGCATCGGTCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAAc < 1:17473779/68‑1 (MQ=255) tACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAAc < 1:23203940/68‑1 (MQ=255) aCGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACt < 1:11046770/68‑1 (MQ=255) cTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCATCTGAt > 1:17954181/1‑68 (MQ=255) ttGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGAt < 1:27249137/67‑1 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataaga > 1:5539462‑M2/1‑7 (MQ=255) aTCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:14698271/1‑66 (MQ=255) aTCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:13032151/1‑66 (MQ=255) tCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatg > 1:26388575‑M2/1‑6 (MQ=255) cGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt > 1:9819460‑M2/1‑5 (MQ=255) cGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt < 1:24844663‑M2/68‑64 (MQ=255) cGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt > 1:16886236‑M2/1‑5 (MQ=255) cGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt > 1:15404365‑M2/1‑5 (MQ=255) ggCtactcttatggaggccggataagacgcggcccgcgtcgcatccggcaatcccgaataagatgttt < 1:2459096‑M2/68‑66 (MQ=255) ggCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgttt < 1:1909640‑M2/68‑66 (MQ=255) ggCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgttt < 1:10366249‑M2/68‑66 (MQ=255) gcgcTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtcttct < 1:13182483/67‑1 (MQ=255) | CGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCT > CP009273/1405192‑1405324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |