| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 394482 | NA (NA) | 5 (0.010) | 4/98 | NT | NA | coding (308/309 nt) | yaiY | DUF2755 family inner membrane protein |
| ? | CP009273 | = 394503 | NA (NA) | coding (287/309 nt) | yaiY | DUF2755 family inner membrane protein | |||||
GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/394421‑394482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCC < CP009273/394503‑394430 GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:10793216/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:25772473/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:27735987/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:2106969/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:20704178/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC < 1:20408927/68‑1GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:4343550/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:5028132/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:5259981/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC > 1:986491/1‑68GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGC < 1:13202598/68‑1GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATCTAAAAATTACTTGC > 1:4995413/1‑68 TCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCG > 1:6832177/1‑67 TCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCG > 1:22247618/1‑67 TCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCG > 1:13076696/1‑67 GCCGCATCTGACAATGTAAAACTTACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCG > 1:6033395/1‑67 ACAATGTAAAACTTACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACG > 1:30483175/1‑67 ACAATGTAAAACTTACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACG > 1:946439/1‑67 CAATGTAAAACTTACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACG > 1:372593/1‑66 AATGTAAAACTTACTGGCGACATCGCCGCGAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCT > 1:32628940/1‑68 TTACTGGCGACATCGCCGCCAGTATGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGG > 1:3421434/1‑65 TTACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCGTGAAACGCGTTATCTGG > 1:1993177/1‑65 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:33262168/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:8994311/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:33290567/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:31811180/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:31056643/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:4643602/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:28142340/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:4852218/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:27927321/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:4890695/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:26182833/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:11048955/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:11947319/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:1723968/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:16252163/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:24860247/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:18926619/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG < 1:19840437/67‑1 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:21839250/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:21801742/1‑67 ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:1431749/1‑67 ACTGGCGACATAGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTG > 1:32018211/1‑67 CTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGAC > 1:22237122/1‑68 CTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGAC < 1:7222397/68‑1 CTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGAC < 1:14487669/68‑1 CTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGAC < 1:16615236/68‑1 CTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGAC < 1:249074/68‑1 TGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACA < 1:5048783/68‑1 TGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCCGCCTGAAACGCCTTATCTGGCCTGACA < 1:16544579/68‑1 GGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACAT > 1:17591796/1‑68 GGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACAT > 1:8875423/1‑68 GGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACAT < 1:13038152/68‑1 GGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACAT < 1:18320428/68‑1 GCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACAT > 1:120416/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:4805496/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:17944044/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:3817630/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT < 1:18454889/67‑1 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:18628221/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:21761096/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:7160831/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT < 1:9756502/67‑1 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:8198790/1‑67 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT < 1:86398/67‑1 CGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:27596935/1‑67 CGACATCGCCGCCAGTAAGTTTAACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATT > 1:27571221/1‑67 GACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACTCCTTATCTGGCCTGACATTCC < 1:33713848/68‑1 GACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCC < 1:26846588/68‑1 GACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCC < 1:885234/68‑1 GACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCC < 1:24755397/68‑1 GACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCC < 1:1757111/68‑1 GATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/394421‑394482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCGACATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCC < CP009273/394503‑394430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |