| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 394482 | NA (NA) | 5 (0.010) | 4/98 | NT | NA | coding (308/309 nt) | yaiY | DUF2755 family inner membrane protein |
| ? | CP009273 | = 394503 | NA (NA) | coding (287/309 nt) | yaiY | DUF2755 family inner membrane protein | |||||
Only 100 of 448 total aligned reads displayed.
ACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAA > CP009273/394416‑394549 | aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:10127370/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:25194362/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:24632152/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:4441842/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:23949832/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:23609926/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:22188896/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:5457362/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:19452255/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:18945975/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:5974680/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:18526455/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:14623898/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:979066/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:11279133/1‑67 (MQ=255) aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:31911554/1‑65 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:10793216‑M1/1‑62 (MQ=255) tCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg > 1:22247618‑M1/1‑60 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa < 1:8247546/68‑1 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa < 1:15436362/68‑1 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa > 1:33886067/1‑68 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa < 1:8003427/68‑1 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa > 1:21496243/1‑68 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa < 1:3904155/68‑1 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:26426948/1‑68 (MQ=255) ggAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTC < 1:885234‑M2/68‑1 (MQ=255) ggAATGTCAGGCCAGATAAGGAGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTC < 1:33713848‑M2/68‑1 (MQ=255) aaTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG > 1:21761096‑M2/1‑67 (MQ=255) aaTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG > 1:4805496‑M2/1‑67 (MQ=255) aTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCC > 1:17591796‑M2/1‑68 (MQ=255) aTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCC < 1:13038152‑M2/68‑1 (MQ=255) gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG < 1:249074‑M2/68‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:1723968‑M2/67‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT > 1:16252163‑M2/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCa < 1:5661008/66‑1 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:18137443/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg < 1:302369/67‑1 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:26604579/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCACTGCAg > 1:29576153/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACATACTGGCGGCGATGTCGCCAGTaa > 1:3421434‑M2/1‑63 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:27823108/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:29865893/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:20819029/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:16780909/67‑1 (MQ=255) aTAAGGCGTTTCAGGCCGCAGCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa < 1:9497422/68‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTTCAGCCATa > 1:5956997/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCa < 1:7416412/65‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa > 1:23172841/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa > 1:27624263/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:12477641/68‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:15750154/68‑1 (MQ=255) aaGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgc > 1:8542459/1‑68 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:19917526/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:33444349/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:5127491/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgc > 1:13626642/1‑67 (MQ=255) ggCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg > 1:22665216/1‑67 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:20490547/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:6664075/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:15053282/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTAGCCAGTGCAGCCATAGCGcc > 1:13955117/1‑68 (MQ=255) cGTTTCAGGCCGCTTCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:28507144/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTaagttttacattgt > 1:30483175‑M2/1‑53 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTaagttttacattg > 1:372593‑M2/1‑53 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:10312173/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:6377214/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:27969629/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:27469209/1‑67 (MQ=255) ttCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccacc < 1:7111337/67‑1 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCa > 1:31571399/1‑68 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCa > 1:11782696/1‑68 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCa > 1:13170393/1‑68 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaa > 1:2684752/1‑68 (MQ=255) gCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaaaa < 1:30866342/68‑1 (MQ=255) gCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaaaa < 1:24297610/68‑1 (MQ=255) aTCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCTCTGCAAAAAt > 1:16729695/1‑68 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:31102307/1‑68 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:19753941/1‑68 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:12197865/1‑68 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:32180960/1‑68 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:13350938/1‑68 (MQ=255) aaTGTAAAACTTactggcgacatcgccgcgagtaagttttacattgtcagatgcggcctgaaacgcct > 1:32628940‑M1/1‑12 (MQ=255) aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:20003523/1‑67 (MQ=255) aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg < 1:8339924/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg > 1:9125487/1‑67 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:25586839/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:1437049/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACAACTGCAAAAATGAGGCAg > 1:33178115/1‑67 (MQ=255) tGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg > 1:2911038/1‑66 (MQ=255) tAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct > 1:18343089/1‑67 (MQ=255) tAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct > 1:18816669/1‑67 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:17955566/68‑1 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:16137580/68‑1 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:22879780/68‑1 (MQ=255) aaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctact < 1:23430863/68‑1 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:2121003/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:4924081/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:3493339/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:26102582/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:28393871/1‑68 (MQ=255) | ACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAA > CP009273/394416‑394549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |