| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 351 (0.850) | 31 (0.090) | 12/98 | NT | 8.7% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 341 (0.940) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 ggGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCTATCTGC < 1:15104422/65‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:11183069/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:33169968/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:4749428/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:5543466/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:1550835/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:27174744/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:16463873/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:18855467/67‑1GTGGGGGGGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATATGC < 1:20715374/67‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:6539771/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:4669533/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:31189749/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:2848163/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:6539741/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:18623/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:18432790/68‑1 GGTGGCGAATGCTCGCGAGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:2848144/68‑1 GCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:32542671/64‑1 ATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAA > 1:12290038/1‑68 tgcGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGT > 1:12182453/4‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCTATCTGCTGGCGCGTGTTCGCCAGCAGATTGGAGGAGg > 1:26884869/1‑67 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCAGATTGAAGAAGT > 1:4075283/1‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGGAGT > 1:28484494/1‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCGGGCGCATTTTCGCCCGCAGATTGAAGAAGT > 1:32067540/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATTTTCGCCAGCAGATTGAAGTAGTAAA > 1:28606631/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATTTTCGCCAGCAGATTGAAGAAGTAAA > 1:29408594/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCGAGCAGATTGAAGAAGTAAA > 1:6831001/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAA > 1:17680146/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAA > 1:33263385/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAA > 1:24647975/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGAGTGAAGAAGTAAA > 1:4950936/1‑68 CTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:16029997/1‑68 TCTTTAAGCGAGTATTTACTTCTTCAATATGCTGGCGCATATTCGCCCGCAGATTGAAGTAGTTAAT > 1:15726572/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:3446244/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:33143176/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:8119765/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:22606315/1‑67 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCAGATTGAAGAAGGAAATACTC > 1:26996103/1‑68 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:16496208/1‑68 AAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:20347879/1‑66 AGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTATATACTCGCT > 1:33107909/1‑68 AGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCT > 1:7326900/1‑68 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:32521363/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:24836229/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:13959510/1‑67 AGTATTTACTTCTTCAATCTGCTGGCGCATATTGGCCGGCAGAGTGGAGAAGTAAATACTCGCTTACA > 1:11437543/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:8829860/1‑68 ACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCGTACAGAGCACA > 1:23181981/1‑68 TCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATG > 1:7924661/1‑68 CTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTC > 1:29784468/1‑67 GCTGGCGGATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:7843974/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACCGAGCACAATGGCGCTTCGC > 1:8548561/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGCGCACAATGGCGCTTCGC > 1:4071725/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGTGCTTCGC > 1:3430660/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:2144060/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:33628514/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:9440054/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:11185209/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:8496294/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:33988261/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:16753970/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:19767077/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCGTACAGCGCACAATGGCGCTTCGC > 1:11522048/1‑67 TGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCG < 1:27566848/68‑1 TGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCG < 1:23199141/68‑1 GGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGA > 1:20144386/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATTCTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:20622005/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGCGCACAATGGCGCTTCGCGCGAGC > 1:19757010/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:33343170/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:9034727/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:14112968/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:8566337/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:6925647/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:22702572/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:5248845/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:31299397/1‑68 CGCATATTCGCCAGCAGAGTGAAGAAGTAAATACTCGCTTACAGCGCACAATGGAGCTTCGCGCTAGC > 1:26376295/1‑68 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:20613930/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:27778086/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:31823875/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:9465747/67‑1 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |