| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 351 (0.850) | 31 (0.090) | 12/98 | NT | 8.7% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 341 (0.940) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 513 total aligned reads displayed.
GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGG > CP009273/410216‑410348 | ggCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGa < 1:8800510/68‑1 (MQ=255)ggCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGa > 1:150285/1‑68 (MQ=255) aTGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATg < 1:14774622/68‑1 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:31299397‑M2/1‑66 (MQ=255) gCTAGCGCGAAGCTCCATTGTGCGCTGTAAGCGAGTATTTACTTCTTCACTCTGCTGGCGAATATGcg > 1:26376295‑M2/1‑66 (MQ=255) tCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgcc > 1:20144386‑M2/1‑64 (MQ=255) cgcgcgAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgcca < 1:27566848‑M2/68‑6 (MQ=255) cgcgAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagc < 1:33628514‑M2/68‑8 (MQ=255) gcgAAGCGCCATTGTGCGCTGTACGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagc > 1:11522048‑M2/1‑60 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:3095073/68‑1 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:16469760/68‑1 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:13863861/68‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:10784932/67‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTAGTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:28523677/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:12921904/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:25765558/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:220026/68‑1 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:8453818/1‑68 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:10652967/1‑68 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:2079878/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:2223850/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:23795892/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:30195030/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:5260232/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:14200428/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:4789585/68‑1 (MQ=255) ttGTGCGCTGTACGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:27730844/68‑1 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:24213229/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:32824475/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:3879803/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:13661904/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCGGGCGcattttcgcccgcagattgaagaagt > 1:32067540‑M1/1‑42 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGcattttcgccagcagattgaagaagtaaa > 1:29408594‑M1/1‑39 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:10457688/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:33886626/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:27457860/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:27979934/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:28817211/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:29759221/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:17545048/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:21009521/1‑67 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaat > 1:3446244‑M1/1‑37 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCCGCGCCGCGCTGTGTTCTGCg > 1:8959078/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:4281077/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:7541209/1‑68 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt > 1:19156866/1‑67 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt > 1:28279249/1‑67 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactc > 1:20347879‑M1/1‑32 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:32521363‑M2/1‑38 (MQ=255) aGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgct > 1:7326900‑M2/1‑37 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:33413785/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:4500064/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:31851850/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:5615912/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:6131381/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:925094/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:30679403/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:11242980/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCAGCGCTGTGTTCTGCGATGCGtt > 1:777085/1‑67 (MQ=255) taGTATTTACTTCTTCAATCTGCTTGCTAATATGCGACAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:805237/65‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:14059628/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:3461610/66‑1 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:29950821/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:29034339/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:26168796/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:20597775/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:1657338/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:3225193/1‑68 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagag > 1:16029997‑M2/1‑30 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacaga > 1:33143176‑M2/1‑30 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCa < 1:19630448/66‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt > 1:27095972/1‑68 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt < 1:17846681/68‑1 (MQ=255) aTTAACTACTTCAATCTGCGGGCGAATATGcgccagcatattgaagaagtaaatactcgcttaaaga > 1:15726572‑M2/1‑30 (MQ=255) tttACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagc > 1:17680146‑M2/1‑29 (MQ=255) tttACTTCTTCAATCTGCTCGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagc > 1:6831001‑M2/1‑29 (MQ=255) ttACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgtgt > 1:4957225/1‑68 (MQ=255) tACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGtgtg > 1:18312305/1‑68 (MQ=255) tACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGtgtg > 1:12628051/1‑68 (MQ=255) cctcctccAATCTGCTGGCGAACACGcgccagcagatagaagaagtaaatactcgcttacagagcaca > 1:26884869‑M2/2‑26 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagcgca > 1:12182453‑M2/1‑26 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGAGTTCTGCGATGCGTTCCCAGTGTgg > 1:16847719/1‑68 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:18731831/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:25027705/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGa < 1:34297338/68‑1 (MQ=255) ttcttcAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagcacaat > 1:12290038‑M2/1‑24 (MQ=255) tcttcAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatg > 1:7924661‑M1/1‑17 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:23046006/1‑68 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:10044659/1‑67 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:23567588/1‑67 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:9708325/1‑67 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttaccgagcacaatggcgcttcgc > 1:8548561‑M1/1‑7 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagcgcacaatggcgcttcgc > 1:4071725‑M1/1‑7 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcg < 1:2144060‑M1/68‑62 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgc > 1:19767077‑M1/1‑7 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc > 1:22702572‑M1/1‑2 (MQ=255) cGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg > 1:6931041/1‑68 (MQ=255) cGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg > 1:31615191/1‑68 (MQ=255) gcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc < 1:9465747‑M1/67‑67 (MQ=255) gAATATGCGCCAGCGCCGCGCGGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:24704037/67‑1 (MQ=255) | GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGG > CP009273/410216‑410348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |