| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1280805 | 434 (1.050) | 20 (0.060) | 6/96 | NT | 5.1% | coding (211/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 |
| ? | CP009273 | = 1280852 | 377 (1.060) | coding (258/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 | |||||
Only 100 of 125 total aligned reads displayed.
TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1280731‑1280805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgcgGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < CP009273/1280852‑1280786 TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGT > 1:7151817/1‑68TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGT > 1:13625936/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:10818455/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:3395029/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:11283160/68‑1 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:7244181/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:18282136/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:32254421/68‑1 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:20812644/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:5301931/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:16803182/68‑1 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:5292606/1‑68 CTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGG < 1:29358219/68‑1 CTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGG < 1:5406708/68‑1 GCGATTTCACGACGATGGATCCGCGCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC < 1:17037798/68‑1 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:4914552/1‑68 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:27931920/1‑68 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:17071088/1‑68 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGAGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:4691117/1‑68 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:30323705/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:22842381/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:27637504/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:33993622/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:3476084/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:349172/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:10771664/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:34402584/67‑1 GATTTAACGACGATGGATCCGCGCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:19513004/67‑1 GCGCAGTACAGCGAACTGTTCGACCGTGGCCGGGGTCGCGGGGTTCGGCGTGCACATGTTCAAACAG > 1:32995625/1‑67 GCGAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACG > 1:2858250/1‑68 GCGAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGGGCACATGGTAAAACAGGAACAGTGACG > 1:3244239/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGCTTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:31861111/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGCTTCGCCGGGCGCATGGTCAAACAGCAACAGTGCCGTG > 1:26633207/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGGACATGTTCAAACAGCAACAGTGACGTG > 1:22221283/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:4158940/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:14607144/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:19784124/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:12562082/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGGGGCCATGTTCAAACAGCAACAGTGACGTG > 1:27621970/1‑68 ACTGTTCGACCGTGGCCGCGGTCGCGGGTTTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGC > 1:13949805/1‑68 GTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCG > 1:5017970/1‑68 TCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGG > 1:9384666/1‑67 TCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGG > 1:17526521/1‑67 TCGACCGTGGCCGCGGTCGCCGGATTCGCCGTGCTCATGTTCAACCAGCAACAGTGACGTGGCGCGG > 1:32794697/1‑67 ACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCAC > 1:17414258/1‑68 CGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGG > 1:6358487/1‑68 CGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGG > 1:6292544/1‑68 CGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGG > 1:17521718/1‑68 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:11078055/1‑68 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:19985997/1‑68 CCGCGGTCGCGGGATTCGGCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:12200283/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCCACAGTGCCGTGGCGCGGCCACGGTCGA > 1:32925308/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCGCGGTCGt > 1:23007799/1‑66 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:27850592/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:34316199/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:26761646/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:3838027/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:15153997/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:15135089/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:24324098/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:24310394/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:8494527/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGGGACGTGGCGCGGCCACGGTCGA < 1:6528238/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAA > 1:28641772/1‑35 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:5801994/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:12483230/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:1447564/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:14791275/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:7928230/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:26417992/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:17428340/1‑68 GCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACA < 1:28699360/68‑1 GCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGGGACGTGGCGCGGCCACGGTCGAACA < 1:19379441/68‑1 GCGGGCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACGGTGACGTGGCGCGGCCACGGTCGAACA < 1:24612104/68‑1 GGTCGCGGGATTCGCCGTGCGCATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:9037145/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:31255451/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT > 1:22807553/1‑68 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:8834964/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:21761464/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT > 1:22257388/1‑68 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:69594/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:6762151/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:29989390/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:30295690/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:19124781/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:33474052/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:14744584/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:31778336/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:4797163/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:18682805/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:16851899/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:18640938/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:25225695/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:21963362/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:18309818/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:22669506/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:18173443/68‑1 GGTCGCGGGATTCGCCGTGCACATGATCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:12185546/68‑1 GGTCGCGGGATTCGACGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:18945067/68‑1 GGTCGCGGGATGCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:26921148/68‑1 TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1280731‑1280805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgcgGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < CP009273/1280852‑1280786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |