| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1280805 | 434 (1.050) | 20 (0.060) | 6/96 | NT | 5.1% | coding (211/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 |
| ? | CP009273 | = 1280852 | 377 (1.060) | coding (258/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 | |||||
Only 100 of 720 total aligned reads displayed.
CGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGA > CP009273/1280738‑1280872 | tcgcggctgtttaactgcaagccgtgctgctcgtactgcgccagcaggtccaccatcgccTGGCcgcg > 1:26258563‑M1/61‑68 (MQ=255) gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCgcgc < 1:28278615/68‑1 (MQ=255) gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:33820675‑M1/67‑1 (MQ=255) tttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGcc < 1:10270085/67‑1 (MQ=255) tttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGcc < 1:4697724/67‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:24318838/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:9412339/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:21448268/68‑1 (MQ=255) acgacgATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc < 1:10755957/68‑1 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGCCCGTGGCCGCGCCACGTc > 1:2775274/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:30917226/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:20714164/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:5442516/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:19738076/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:32973783/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:18451884/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:10939287/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTAGACCGTGGCCGCGCCACGTCAc > 1:7177494/1‑68 (MQ=255) cgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACt < 1:13789710/67‑1 (MQ=255) gaTGGATCCGCTCGATGCCCAGGCGCAGTACAGGGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:20386445/68‑1 (MQ=255) gaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:31857437/68‑1 (MQ=255) gaTGGAGCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTGCGACCGTGGCCGCGCCACGTCACTGt < 1:12640636/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:18128713/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:25663361/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:12052420/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:15159618/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:29264595/68‑1 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:23480247/1‑67 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:17134400/1‑67 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:23246934/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:22836418/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:7825947/68‑1 (MQ=255) ggCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACg > 1:23066692/1‑68 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:5749832/1‑68 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:32497078/1‑68 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:4484308/1‑68 (MQ=255) gcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCg > 1:3063828/1‑68 (MQ=255) tACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAAt > 1:34342914/1‑67 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc < 1:29023183/67‑1 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc < 1:21016155/67‑1 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc > 1:4098868/1‑67 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:226245/1‑68 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:3551102/1‑68 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtg > 1:14687492‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGGTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:26951750/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:24160036/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:2226405/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:29532097/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:5979487/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:33247468/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:26012915/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:1123729/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGa < 1:17701362/68‑1 (MQ=255) gAACTGCTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:10055441/1‑67 (MQ=255) aCTGTTCGACCGTGGCCGCGgtcgcgggtttcgccgtgcacatgttcaaacagcaacagtgacgtggc > 1:13949805‑M1/1‑20 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGTCGAATCCCGCGACc < 1:18945067‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:16851899‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:4797163‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:8834964‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:18682805‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:29989390‑M2/68‑2 (MQ=255) gTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcg > 1:14791275‑M2/1‑64 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:27486060‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:11406444‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:28501777‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:8494527‑M2/1‑62 (MQ=255) cgccTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg < 1:30187904‑M1/64‑1 (MQ=255) aCCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccac > 1:31575223‑M1/1‑12 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:12347277/1‑68 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:1443799/1‑68 (MQ=255) ccGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg < 1:33661653/67‑1 (MQ=255) cGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacgg > 1:17521718‑M1/1‑10 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCGAGGc > 1:34145393/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:13113277/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:9090856/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:26493538/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCTAATCCCGCGAGCGCGGCCAGGCGAt > 1:7633114‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGACTCCCGCGACCGCGGCCAGGCGAt > 1:22145040‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:12830202‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:16535956‑M1/1‑68 (MQ=255) GCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg < 1:15639278‑M1/68‑1 (MQ=255) ccGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga > 1:26761646‑M1/1‑5 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:30381936‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:2006835‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:653526‑M1/1‑67 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:6217609‑M1/1‑67 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:17383008‑M1/1‑67 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:4334792‑M1/1‑67 (MQ=255) cgcgCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcggccacggtcgaac > 1:16026642‑M2/1‑51 (MQ=255) CGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtggt > 1:3766756‑M1/1‑68 (MQ=255) gcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaaca < 1:28699360‑M1/68‑66 (MQ=255) gcggtcgcgggattcgccgtgcacatgttcaaacagcaacagggacgtggcgcggccacggtcgaaca < 1:19379441‑M1/68‑66 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:5022070‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:31255451‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:69594‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:21761464‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:815848‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:25225695‑M1/68‑68 (MQ=255) GCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtggtgg < 1:24850332‑M1/67‑1 (MQ=255) GCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGa > 1:13447293‑M1/1‑68 (MQ=255) | CGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGA > CP009273/1280738‑1280872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |