| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 279 (0.670) | 19 (0.060) | 10/92 | NT | 5.9% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 373 (1.100) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 131 total aligned reads displayed.
TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:31205960/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:6741965/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:28944206/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:2823413/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:22633739/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:27653999/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:29705094/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:20492421/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:19679162/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:25202220/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:30077033/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:1669197/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:15887837/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:30887253/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:25736828/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:10709711/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:32917004/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:12860740/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:1226317/1‑68 GAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTTACGTTGTAAAACCAGAGACG < 1:27413774/68‑1 GAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACG < 1:5098421/68‑1 GAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACG < 1:26126795/68‑1 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:18912560/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:26268087/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:6860737/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:34255852/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:11382828/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:26212197/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:21830243/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:33861354/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:29841868/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:6124800/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:5442989/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:7850699/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:25049262/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:33159552/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:12849920/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:13766473/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:15128555/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:14854776/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGACAAAGAACACCCGCTAACGTTGTAAAACAAGACACCCA > 1:18553708/1‑68 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:22291755/66‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:19051127/66‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:14380593/66‑1 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:17159404/1‑67 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:32638397/1‑67 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:1180505/67‑1 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:9647650/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:2333843/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:15319722/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:33716944/67‑1 AGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGA < 1:4000522/67‑1 TTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACC < 1:10783930/67‑1 TTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACC < 1:27073177/67‑1 TTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACC < 1:620203/67‑1 TTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAAC < 1:12451414/66‑1 ACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGGCGCTG > 1:15743537/1‑68 CCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGAGGCGTCTCGGGTTT > 1:4393927/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:33018698/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:32890941/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:31927073/1‑68 AACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGG > 1:28605351/1‑68 ACCAGAGACGCATCCGGCGACAGGGCCCAAATGCCGGATGCGTCTCTGGGTTTACAACGTTACCGGGg > 1:2912958/1‑67 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGGTGCGGCTCTGGTTTTACAGCGGTACCGGGT > 1:12400571/1‑68 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:24413404/1‑68 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:26947625/1‑68 GACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:24055521/1‑68 ACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGATCTT > 1:12376209/1‑67 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTT < 1:13472803/67‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:30471592/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:15733996/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:8320521/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:5245197/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:20387520/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:9044303/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:5916357/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTGTTACACCGTTACCGGGTGTTCTT > 1:2781141/1‑66 ATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTC > 1:1711276/1‑67 ATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTC > 1:541567/1‑67 TCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCG > 1:32855289/1‑67 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:30923143/68‑1 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTAACGGGTGTTCTTTCTCG > 1:7030914/1‑66 GGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:10693608/1‑68 GCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:9749484/1‑67 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:24150493/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:10604236/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:13335768/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:15466695/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:21228010/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:23679637/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:3755063/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:24823272/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:24931621/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:25791478/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:26992406/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:32825678/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:33091873/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:25656432/1‑66 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:18716354/1‑66 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:8863210/1‑66 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |