| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 279 (0.670) | 19 (0.060) | 10/92 | NT | 5.9% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 373 (1.100) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 458 total aligned reads displayed.
GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 | gaagtgaagtTTAAGTAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCa > 1:21102967/1‑68 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCa > 1:3745231/1‑68 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCa > 1:28706184/1‑68 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:33716944‑M1/67‑1 (MQ=255) agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAt < 1:16806314/67‑1 (MQ=255) agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAt < 1:34146952/67‑1 (MQ=255) agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAt < 1:23572702/67‑1 (MQ=255) agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAt < 1:26979405/67‑1 (MQ=255) tgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTg > 1:17789645/1‑68 (MQ=255) agtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGt > 1:20516164/1‑67 (MQ=255) agtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGt > 1:33925860/1‑67 (MQ=255) agtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGt > 1:19533204/1‑67 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCgacaggaacc < 1:620203‑M1/67‑11 (MQ=255) gAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTc > 1:21610587/1‑67 (MQ=255) gAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTc > 1:10031298/1‑67 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:15466695‑M2/67‑2 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgcc > 1:10693608‑M2/1‑65 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:25656432‑M2/1‑65 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:18716354‑M2/1‑65 (MQ=255) gagaAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggat > 1:541567‑M2/1‑60 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:30471592‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:5245197‑M2/66‑11 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcggcgctg > 1:15743537‑M1/1‑38 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTgc > 1:33432898/1‑67 (MQ=255) acCCGGTACCGCTGTAAAACCAGAGCCGCACCCGGCATTTGGTTCCTGTCgccggatgcgtctctggt > 1:12400571‑M2/1‑50 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:8864963/1‑68 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:27389306/1‑68 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:24277642/1‑68 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:30880342/1‑67 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:32268877/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:22426024/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:13268607/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGATCCTGTCGCCGGATGCGGCTTGAACg < 1:14514054/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTAGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:31002311/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:14082850/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:20661960/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:26530303/68‑1 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGcc < 1:30164908/68‑1 (MQ=255) tAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTa > 1:27125035/1‑68 (MQ=255) aaCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTa > 1:4704467/1‑67 (MQ=255) aaCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTa < 1:11041286/67‑1 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaac > 1:31927073‑M2/1‑42 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaac > 1:32890941‑M2/1‑42 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:428522/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:6017390/1‑67 (MQ=255) cGTTGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacg > 1:12371181‑M1/1‑27 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgt > 1:33018698‑M1/1‑26 (MQ=255) tGTAATACCAGAGACGCTTGCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:26629546/68‑1 (MQ=21) tGTAAAACCAGGGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:16887081/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCgg > 1:33269478/1‑67 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:5704289/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:2617922/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:12499955/68‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt > 1:4987887/1‑67 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:29684636/67‑1 (MQ=255) aaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa > 1:11932516/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:10396535/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:31267360/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:25969842/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:13690477/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:23825482/68‑1 (MQ=255) ccAGAGACGCATACGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:1614780/1‑68 (MQ=255) caagatACGCATCCTGCATTTTGTTCCTGTAGCCGTATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:1942404/66‑1 (MQ=14) cAGAGACGCATCCTGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaaa < 1:14688804/68‑1 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:28186974/1‑67 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:17983974/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:30712592/1‑68 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTACCCGGCCTACAAAACCAt > 1:28542803/1‑68 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:9162840/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:2897748/1‑67 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttcttt < 1:13472803‑M1/67‑58 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:7529081/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:31646303/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:12907879/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:24609646/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:3985391/1‑68 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:19035096/1‑68 (MQ=255) aTCCTGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:11642141/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:22680886/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa > 1:15167552/1‑68 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:8424528/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:29158955/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:20050968/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:21884022/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa > 1:24490945/1‑68 (MQ=255) tCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTCTCCGGCCTACAAAACCATACata > 1:11271243/1‑65 (MQ=255) ccGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaacgggtgttctttctcg > 1:7030914‑M1/1‑5 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:25273746/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:2332064/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:2228202/1‑68 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:18187766/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:6680744/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:827788/68‑1 (MQ=255) gCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:9749484‑M1/1‑2 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:32825678‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:24931621‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:24150493‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:21228010‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:164860‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:10604236‑M1/67‑67 (MQ=255) | GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |