| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2436008 | 308 (0.740) | 16 (0.050) | 7/94 | NT | 6.0% | coding (766/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | = 2436093 | 239 (0.690) | coding (851/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435934‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTG < CP009273/2436093‑2436028 AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:233486/1‑68 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:8068796/1‑67 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:12664098/1‑67 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:25033131/1‑67 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:3101668/1‑67 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:32253119/1‑67 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:8051902/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCGCCCCTGCTCCGC > 1:16087031/1‑68 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:20786011/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:19783611/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:238071/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:2384998/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:28920709/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:16676386/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:15767317/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:4685097/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:5705468/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:6190606/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:9120703/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:10032736/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCACCGC > 1:4809243/1‑67 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:22500533/68‑1 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC > 1:10141629/1‑68 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:12646844/68‑1 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGC < 1:7311709/67‑1 gtGCGCAAACGGGAAATGCTTTGCGGTGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTt < 1:626573/66‑2 CATTACCGCTCCCCTGCTCCGCGCCGTTATAGCGCCAGCGACACCAACGCGCTGGCGTGACCACCGCC > 1:13950891/1‑68 CATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCC > 1:18778635/1‑68 TTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGA < 1:17904188/68‑1 ACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCACTACCACCGCCGATt > 1:5063755/1‑67 CCGCTCCCCTGCTCCGCGCCGTTATAGCGCCAGCGACAACAACGCGCTGGCCATACCACCGCCGTTAA > 1:23235818/1‑68 CCGCTCCCCTGCTCCGCGCCGTATTAGCGCCAGCGCCCACAACGCGCTGGCAATCCCGCCGCCGCTAA > 1:10722806/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGAGAA > 1:29806215/1‑68 CGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCCCTGGGAATACCACCGCCGAT > 1:7929210/1‑65 GCTCCCCTGCTCCGCGCCGTAATAGCGCCCGCGCCAACAACGCGCTGGCAATACCACCGCCGATAATC > 1:20945428/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACACCGCGCTGGCAATACCACCGCCGATAATC > 1:7188008/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAGTACGACCGCCGATAATC > 1:6828932/1‑68 TCCCCTGCTCCGCGCCGTAATAGCGCCGGCGACAACAACGCGCTGGCAATACCACCGCCGATATTCG > 1:28841587/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATCCCACCGCCGATAATCG > 1:23280806/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCCCCGCCGATAATCG > 1:25060771/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCG > 1:596929/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCG > 1:30092032/1‑67 TCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCACCGCCGATACTCGCAGGTTCCC > 1:1992670/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCGCCGCCGATAATCGCCGCTACCC > 1:9831337/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGCTAATCGCCGCTTCgc > 1:21333401/1‑66 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:10794267/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:19668196/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:6705887/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:30449311/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:30016176/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:13487173/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:28373458/1‑68 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:18999445/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:28111764/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:21460124/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:4968204/65‑1 GCCGTATTAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATACTCGCCGCTTCCCGTTT > 1:9126626/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:19529566/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT < 1:14925828/67‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT < 1:8699164/67‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGAGAATCGCCGCTTCCCGTTT > 1:499635/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCCATAATCGCCGCTTCCCGTTT > 1:14535969/1‑67 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:17904947/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:22675998/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:31897906/67‑1 GTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTG < 1:19672673/68‑1 AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435934‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTG < CP009273/2436093‑2436028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |