New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2930783 =NA (NA)10 (0.030) 5/90 NT NA intergenic (+65/‑14) fucI/fucK L‑fucose isomerase/L‑fuculokinase
?CP009273 2930811 = NA (NA)coding (15/1449 nt) fucK L‑fuculokinase

Only 100 of 255 total aligned reads displayed.

ACAGTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2930859‑2930783
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGG  >  CP009273/2930811‑2930877
                                                                                                                                                
ACAGTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTT                                                                              >  1:11568128/1‑68
   GTCGAGTACCAGGATACCTTATTGTTTCATAATCGCTCCTGCAAAATAGCCGGATAACATTGCTTAT                                                                            >  1:18815882/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:10480836/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:15623876/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:21915715/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:10243915/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:13407043/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:25947591/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:31516660/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTAT                                                                            >  1:705444/1‑67
   GTCGAGTACCAGGATAACTTCTTGTTTCAGAATCGCTCCTGCGATATAGCCGGGTAACATTGCTTATC                                                                           >  1:16245489/1‑68
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         <  1:29081079/68‑1
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         >  1:4930730/1‑68
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         <  1:6550077/68‑1
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         <  1:23788947/68‑1
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         <  1:7438481/68‑1
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         >  1:19475736/1‑68
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         <  1:8891776/68‑1
     CGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         <  1:25616336/68‑1
      GAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGG                                                                        <  1:18687116/68‑1
       AGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         >  1:3136273/1‑66
       AGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         >  1:3119101/1‑66
       AGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         >  1:13495525/1‑66
       AGTACCAGGATAACTTCTTGTTTCACAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCG                                                                         >  1:17500825/1‑66
        GTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGC                                                                       <  1:30689012/67‑1
        GTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAACCGGATAACATTGCTTATCCGGC                                                                       <  1:25043823/67‑1
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCGATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:30355603/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:28019350/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:24345297/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:24072574/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:1168176/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:11154533/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     <  1:6105177/67‑1
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:22777630/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:2684464/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:14462963/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:34069428/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:33957300/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:8520177/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:20115867/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:29952671/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:30824019/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:16517789/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA                                                                     >  1:15333886/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTACCCGGCTA                                                                     >  1:24537641/1‑67
          ACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCCGATAACATTGCTTATCCGGCTA                                                                     >  1:22350011/1‑67
                               ATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTATATTGCAGGAGCGATTATGAAA                                               <  1:9130416/68‑1
                                                aaAGCCGGATAACATTGCTTAACCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT                              <  1:32604470/66‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTTTGGCGCGACC           >  1:33510728/1‑68
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACC           >  1:14521651/1‑68
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACC           >  1:33439677/1‑68
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:24671829/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:17326237/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:17921319/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:10827933/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:1471363/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:21119496/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:2146326/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:27296583/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:4579533/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:12225215/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:23044441/67‑1
                                                                   TATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAC            <  1:7651492/67‑1
                                                                     TCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAA         <  1:24183687/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:8440801/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:34426942/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:4265365/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:32391750/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:11988164/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:9211552/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:31778429/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:12636653/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:29611914/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:13097655/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:27604420/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:27349980/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        >  1:18217218/1‑68
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:20969867/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:21668269/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:2577527/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAT        <  1:2376691/68‑1
                                                                      CCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAACCTGGTACTCGACTGTGGCGCGACCAAT        >  1:15922937/1‑68
                                                                       CGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       <  1:32028946/68‑1
                                                                       CGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       <  1:16765446/68‑1
                                                                       CGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       <  1:8070126/68‑1
                                                                       CGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       <  1:4065264/68‑1
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGT      <  1:24712622/68‑1
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGT      <  1:7117373/68‑1
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGT      <  1:26654678/68‑1
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGT      <  1:28418025/68‑1
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       >  1:14026408/1‑67
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       >  1:23263750/1‑67
                                                                        GGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATG       >  1:27126501/1‑67
                                                                          CTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCA    >  1:25505416/1‑68
                                                                          CTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCA    >  1:7351901/1‑68
                                                                          CTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCA    >  1:13269458/1‑68
                                                                          CTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCA    >  1:26305488/1‑68
                                                                           TATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAG   >  1:5234641/1‑68
                                                                           TATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAG   >  1:8187085/1‑68
                                                                           TATATTCCAGGAGAGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAG   >  1:5319922/1‑68
                                                                                                                                                
ACAGTCGAGTACCAGGATAACTTCTTGTTTCATAATCGCTCCTGCAATATAGCCGGATAACATTGCTTATCCGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2930859‑2930783
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGG  >  CP009273/2930811‑2930877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.