BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3701734 =	NA (NA)	13 (0.040)	7/96	NT	8.9%	intergenic (‑669/+242)	dppA/proK	dipeptide transporter/tRNA‑Pro
*	?	CP009273	3701742 =	155 (0.370)	13 (0.040)	7/96	NT	8.9%	intergenic (‑677/+234)	dppA/proK	dipeptide transporter/tRNA‑Pro

Only 100 of 327 total aligned reads displayed.

AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGggaggttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3701800‑3701734

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  >  CP009273/3701742‑3701816

AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG                                                                            <  1:2053829/68‑1

AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG                                                                            <  1:31383078/68‑1

 AAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGG                                                                           >  1:15256724/1‑68

    CCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG                                                                        >  1:32701998/1‑68

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT                                                                       <  1:30363169/68‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT                                                                       <  1:2099952/68‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT                                                                       <  1:31965185/68‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT                                                                       <  1:5495874/68‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT                                                                       <  1:12856043/68‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT                                                                       <  1:23038433/68‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG                                                                        <  1:22004525/67‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG                                                                        <  1:31096303/67‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG                                                                        <  1:27790743/67‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG                                                                        <  1:8582661/67‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAG                                                                         <  1:26139815/66‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAG                                                                         <  1:2538548/66‑1

     CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAG                                                                         <  1:17500731/66‑1

     CTGCGCAACGAGCAGGCTTTTTTGCATCTGCAGCTCCTGAGGATGAGAACCTCCGGGGGCAGGGAGG                                                                        <  1:33468830/67‑1

     CTGCGCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCGCCGGGGGCAGGGAGG                                                                        <  1:17029987/67‑1

           AACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCTCAT                                                                 <  1:12037941/68‑1

                      TTTTTTGCATCTGCAGCTCAGGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCTCATCCTCATGAGCT                                                      <  1:21363360/68‑1

                            GCATCTTCAGCTCATTCGGATGAGCACCGCCGGGGGCAGGGAGGTTCTCATCCTCATGAGCTGCAGAT                                                <  1:7351491/68‑1

                            GCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCTCATCCTCATGAGCTGCAGAT                                                <  1:15870786/68‑1

                            GCAGCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCTCATCCTCATGAGCTGCAGAT                                                <  1:11644237/68‑1

                                CTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCTCATCCTCATGAGCTGCAGATGCAA                                            <  1:12410430/68‑1

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:23376648/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:21216837/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:28811901/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:32795269/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:22723566/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:25826020/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:1370229/1‑68

                                                                    GAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAAGTTGG        >  1:14977998/1‑68

                                                                     cGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:4273968/2‑67

                                                                     AGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:32356079/1‑67

                                                                     AGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:12179902/1‑67

                                                                     AGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGG        >  1:6095478/1‑67

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCGAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTC      >  1:24975712/1‑68

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTC      >  1:17738482/1‑68

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTC      >  1:15355355/1‑68

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTC      >  1:14263419/1‑68

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTC      >  1:14095934/1‑68

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGT       <  1:1918870/67‑1

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCGTTTCGAATTTGGTC      >  1:5846575/1‑68

                                                                      GGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCACGTTGAGCAGGCTTTTCGAATTTGGTC      >  1:14643974/1‑68

                                                                        TTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCTTTGAGCAGGCTTTTCGAATTTGGTCG     <  1:8820323/67‑1

                                                                        TTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCG     <  1:9774158/67‑1

                                                                        TTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCG     <  1:10344785/67‑1

                                                                        TTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCG     <  1:1955141/67‑1

                                                                        TTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCG     <  1:16680996/67‑1

                                                                         TCTCTTCCTCATGATCTGCAGATGAAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:26909999/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:11923998/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:17968961/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:33250066/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:16796875/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:34124912/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:34192039/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:3804760/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:3957848/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:4137432/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:4671320/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:13561423/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:24760140/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:647339/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   >  1:6867101/1‑68

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:7043663/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:11316660/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:7489918/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:8035796/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:8333352/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:111620/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:9287107/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:19347498/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:25431943/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:24611443/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:24441885/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:26319301/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:26576615/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:27482937/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:27614273/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:237725/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:28017303/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:28354915/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:28572987/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:29395483/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:29765644/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:30092764/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:21590380/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:30553408/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:20337734/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:19999435/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT   <  1:18184807/68‑1

                                                                         TCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGATTTTCGAATTTGGTCGGT   <  1:506056/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAATAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:22436572/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:16225974/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:4846816/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:3477133/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:7882643/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:25291837/68‑1

                                                                          CTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  <  1:10129066/68‑1

AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGggaggttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3701800‑3701734

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTG  >  CP009273/3701742‑3701816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.