| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4583141 = | NA (NA) | 11 (0.030) | 7/90 | NT | NA | intergenic (+12/+37) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter |
| ? | CP009273 | 4583171 = | NA (NA) | intergenic (+42/+7) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter | |||||
Only 100 of 516 total aligned reads displayed.
TGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTG > CP009273/4583075‑4583207 | tGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAAt < 1:29566954/68‑1 (MQ=255)tGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAAt > 1:5084127/1‑68 (MQ=255) gcgcCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATg < 1:29361199/68‑1 (MQ=255) cgccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATg > 1:23173499/1‑67 (MQ=255) cgccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATg > 1:16807129/1‑67 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:5792051/1‑67 (MQ=255) ccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGccc > 1:21754591/1‑68 (MQ=255) actggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGcc > 1:20327885‑M1/63‑67 (MQ=255) actggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGcc > 1:7928527‑M1/63‑67 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:14515123‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:19755782‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:9783058‑M1/62‑68 (MQ=255) ggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGAt > 1:9024769‑M1/60‑68 (MQ=255) cgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGATa < 1:17298416‑M1/10‑1 (MQ=255) cgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGATa < 1:33958510‑M1/10‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:4458497/68‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:19944306/68‑1 (MQ=255) aaaTGGCCGTGGCAGATTGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGc < 1:31725560/68‑1 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:6449170/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:22039318/1‑68 (MQ=255) tGGCCGTGGCAGATAGCTATGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaa < 1:24801700/68‑1 (MQ=255) tGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaa < 1:9562948/68‑1 (MQ=255) ggCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaaa > 1:7233153/1‑68 (MQ=255) cggggCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:25199202/65‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:24362018/68‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:28456/68‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:12652011/68‑1 (MQ=255) ggCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTAt < 1:25032719/68‑1 (MQ=255) aTAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGc > 1:33048357/1‑68 (MQ=255) aTAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGc > 1:21425166/1‑68 (MQ=255) tAGCGAGGATAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:9106811/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:27721712/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:24182068/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:31918580/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:23416232/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:6135729/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:10409914/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:12865666/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:14191026/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:19527053/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:17995894/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGGTATCggg < 1:2621411/66‑1 (MQ=255) tAGAGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:27010967/66‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATaa < 1:5346155/67‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAg > 1:10624371/1‑68 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:14925674/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:26746444/1‑68 (MQ=255) gagaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag > 1:27423560/1‑68 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga > 1:28119736/1‑68 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:18230315/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:32150675/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:29843954/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:21234770/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga < 1:26876427/66‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAAAGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:3674540/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:3888694/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:15212064/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:33669098/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGAt > 1:28727354/1‑68 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGAt > 1:31144644/1‑68 (MQ=255) aCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTa > 1:8031584/1‑68 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTaa > 1:12507086/1‑67 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:32575371/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:15585292/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:8822724/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:7442425/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:5598888/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:1336280/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:7758942/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:19153772/68‑1 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:10997253/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:22599057/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:4210322/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:4915011/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:13555906/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:8498239/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:31291195/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:25734888/1‑68 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:11140856/67‑1 (MQ=255) aTTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGt > 1:34397512/1‑68 (MQ=255) tttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTgg < 1:22930339/68‑1 (MQ=255) tttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTgg > 1:6862272/1‑68 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:16462120/68‑1 (MQ=255) ttAATCGCCATGAAAATGCACGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:2879104/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:31566352/68‑1 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:10027409/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:30885017/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:30538979/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:11839290/1‑68 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:1627674/68‑1 (MQ=255) cGCCATAAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:32353230/68‑1 (MQ=255) aaaaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCg > 1:23906519/1‑66 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCt > 1:30044340/1‑67 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:17663903/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:16971463/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:12205307/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:18426180/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:701699/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:23747566/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:13936937/1‑68 (MQ=255) | TGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTG > CP009273/4583075‑4583207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |