| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 232154 | 273 (0.660) | 15 (0.040) | 6/92 | NT | 6.1% | coding (336/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids |
| ? | CP009273 | = 232160 | 240 (0.700) | coding (330/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids | |||||
Only 100 of 559 total aligned reads displayed.
CATCACAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCC > CP009273/232087‑232221 | ctcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:877953/67‑1 (MQ=255) atcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:30410537/68‑1 (MQ=255) atcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:24663573/68‑1 (MQ=255) atcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:29193868/68‑1 (MQ=255) atcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:1139366/68‑1 (MQ=255) atcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:3643623/68‑1 (MQ=255) atcaCAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGcc < 1:12640453/68‑1 (MQ=255) tcaCAGCGTTCGTTTTCCGGGTGTCCGGGATGGCGTTTAACCCATTGCCATTTGATTTGATGCTGcc < 1:13427695/67‑1 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:23691190/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:16143985/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:15483225/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:15142792/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:14828163/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:26282602/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:7599082/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:799116/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:25670483/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:11210578/1‑68 (MQ=255) acaGCGTTCGTTTTCCGGATGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCa > 1:10065087/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:5184318/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:27294793/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:28203992/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:16744895/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:11619826/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:17423500/1‑68 (MQ=255) aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:34382743/1‑68 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:34506522/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:20487324/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgca < 1:25526089‑M2/68‑4 (MQ=255) tggttttCCGGGTGTCGGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:28024151‑M2/3‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:29422253‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:6435718‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:23977162‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:26944663‑M2/1‑63 (MQ=255) tcgttATCCTGTTTTACGGCATGGACTTTAACCCAATCCCATTTCATTTGATGCTGCCCCACTgcagc < 1:29838650/68‑1 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:16614198‑M2/1‑62 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca < 1:20906220‑M2/68‑7 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:32463518‑M2/1‑62 (MQ=255) gttTTCTGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcat > 1:20091168‑M2/1‑61 (MQ=255) tttCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatca > 1:21311129‑M2/1‑59 (MQ=255) ccGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGa < 1:9065367/68‑1 (MQ=255) ccGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGa < 1:28525265/68‑1 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg > 1:21951933/1‑68 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg > 1:8433853/1‑68 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg < 1:22942458/68‑1 (MQ=255) tgtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaa > 1:3932101‑M2/1‑51 (MQ=255) ccGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatggg > 1:14646852‑M2/1‑48 (MQ=255) cGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatggga > 1:30066409‑M2/1‑47 (MQ=255) ggCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCaga < 1:388269/68‑1 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga < 1:9841790/67‑1 (MQ=255) ggCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatgggaatgggt > 1:31754467‑M2/1‑41 (MQ=255) ccTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGAc > 1:13689497/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:12119456/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:8520321/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:13072529/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:2672427/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:22580012/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:33286510/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCtttggggcagcatcaaatcaattgggaatgggtttaaggcca > 1:28932885‑M1/1‑26 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:10571176/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:18760007/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:2773504/1‑68 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:23441934/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:21410613/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:3061189/1‑67 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:340417/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:32903635/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:24469174/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGAGCGACATTTTTTACTgg < 1:15761306/68‑1 (MQ=255) cccattTGATTTGATGCTGCattggggcagcatcaaatcaattgggaatgggttaaaggccatgccgg > 1:5714867‑M1/1‑20 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:22185695/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:18454653/1‑68 (MQ=255) cccattTGATTTGATGCTACCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:18027811/1‑68 (MQ=255) ccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt > 1:6770307/1‑68 (MQ=255) ccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt > 1:32176981/1‑68 (MQ=255) ccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt > 1:24189628/1‑68 (MQ=255) ccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt > 1:21130037/1‑68 (MQ=255) tttgatttgaTGCTGCattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggaca > 1:9390031‑M1/1‑16 (MQ=255) tttgatttgaTGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGttttt > 1:14453480/1‑68 (MQ=255) tttgatttgaTGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGttttt > 1:12982104/1‑68 (MQ=255) tttgatttgaTGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGttttt > 1:17562991/1‑68 (MQ=255) ttgatttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTTCTGGtttttt > 1:14024826/1‑68 (MQ=255) tgatttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGTTCGACATTTTTTACTGGTTTTTTg < 1:59221/68‑1 (MQ=255) tgatttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTg > 1:10830661/1‑68 (MQ=255) tttgctGCTGCagtggggcagcatcaaatcttatgggaatgggttaaaggccatgccgtacacccgga > 1:19131979‑M1/1‑11 (MQ=255) tttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTg > 1:19688789/1‑65 (MQ=255) tgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGc < 1:31440306/68‑1 (MQ=255) tgatGCTGCCCCAATGAAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGc < 1:1713070/68‑1 (MQ=255) tgctgcattggggcagcatcaattcaaatgggaatgggttaaaggccatgccggacacccggaaaacg > 1:19418628‑M1/1‑6 (MQ=255) tgctgcattggggcagcatcaaatcaaatgggaatgggttaaagggcatgccggacacccggaaaacg > 1:16472394‑M1/1‑6 (MQ=255) tgctgcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacacccggaaaacg > 1:6362657‑M1/1‑6 (MQ=255) gctgcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacccccggaaaacga > 1:7349578‑M1/1‑5 (MQ=255) gctgcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacacccggaaaacga > 1:4575511‑M1/1‑5 (MQ=255) gctgcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacacccggaaaacga > 1:17817167‑M1/1‑5 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:33514806/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:3115934/1‑68 (MQ=255) tgcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacacccggaaaacgaac < 1:25788498‑M1/68‑66 (MQ=255) tgcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacacccggaaaacgaac < 1:2483334‑M1/68‑66 (MQ=255) gcattggggcagcatcaaatcaaatgggaatgggttaaaggccatgccggacacccggaaaacgaacg < 1:818517‑M1/68‑67 (MQ=255) ccccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTcc > 1:30689119/1‑68 (MQ=255) | CATCACAGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCC > CP009273/232087‑232221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |