| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 232154 | 273 (0.660) | 15 (0.040) | 6/92 | NT | 6.1% | coding (336/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids |
| ? | CP009273 | = 232160 | 240 (0.700) | coding (330/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids | |||||
Only 100 of 419 total aligned reads displayed.
AGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAC > CP009273/232093‑232227 | aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:10924685/1‑68 (MQ=255)aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:11211983/1‑68 (MQ=255)aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:34382743/1‑68 (MQ=255)aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:31299484/1‑68 (MQ=255) gCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:16568812/1‑67 (MQ=255) gCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:13535848/1‑67 (MQ=255) cgttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgc < 1:818517‑M2/68‑3 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:17910774/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:12359706/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:34506522/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgca < 1:25788498‑M2/68‑4 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:24227993‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:26944663‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:15916185‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcag > 1:14818405‑M2/1‑63 (MQ=255) gccttttccgGGTGGCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:4532466‑M2/4‑63 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca < 1:17505694‑M2/68‑7 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:12992484‑M2/1‑62 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:6362657‑M2/1‑62 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCC‑ATTTGATTTGATGCTGCCCCAATgcagcat > 1:9442367‑M2/1‑61 (MQ=255) gttTTCTGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcat > 1:20091168‑M2/1‑61 (MQ=255) ttttCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatc < 1:15656695‑M2/68‑9 (MQ=255) ttttCCGGGTGTCCGGCATGGCCTTTAACCCAATCCCATTTGATTTGATGCTGCCCCAATgcatcatc < 1:10640289‑M2/68‑9 (MQ=255) tCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaa > 1:20403425‑M2/1‑57 (MQ=255) tCCGGGTGTACGGCATGGCCTTTAACCCATTCCCATAAGATTTGATGCTGCCCCACTgcagcagcaaa > 1:19131979‑M2/1‑57 (MQ=255) ccGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGa < 1:24749062/68‑1 (MQ=255) ccGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGa < 1:8626566/68‑1 (MQ=255) cGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGAc > 1:13698955/1‑68 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGAcc < 1:15139536/68‑2 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg < 1:16626296/68‑1 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg > 1:21951933/1‑68 (MQ=255) ggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCCGCATCAAGACGt > 1:13957709/1‑68 (MQ=255) ggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGt > 1:292403/1‑68 (MQ=255) ggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGt > 1:30258643/1‑68 (MQ=255) tgtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaa > 1:3932101‑M2/1‑51 (MQ=255) tgtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGtt < 1:24538074/67‑1 (MQ=255) tgtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGtt > 1:23090367/1‑67 (MQ=255) gtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGc < 1:26456725/68‑1 (MQ=255) gtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGc < 1:25594959/68‑1 (MQ=255) gtCCGGCAAGACCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTg < 1:18215098/67‑1 (MQ=255) cGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCag < 1:20899445/68‑1 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAGTGCAGCATCAAGACGTTGCCAgaga > 1:7997789/1‑67 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga > 1:29934863/1‑67 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga > 1:21635771/1‑67 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga > 1:29641553/1‑67 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga < 1:11463080/67‑1 (MQ=255) tGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatgggaatggg > 1:21333829‑M2/1‑42 (MQ=255) tGGCCTTAAACCCATTCCCAATTGATTTGATGCTGCCCCAAAgcagcatcaaatcaaatgggaatggg > 1:28932885‑M2/1‑42 (MQ=255) ggCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatgggaatgggt > 1:31754467‑M2/1‑41 (MQ=255) ggCCTTTAACCCATTCCCATATGATTTGCTGCTGCCCCAATccagcatcaaatcaaatgggaatgggt > 1:12740385‑M2/1‑41 (MQ=255) cTTTAACCCATTCCCATTTGTTTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGAc < 1:32364457/67‑1 (MQ=255) cTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACa > 1:24057621/1‑68 (MQ=255) tttAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAt < 1:30609550/68‑1 (MQ=255) ttAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtt < 1:30684174/68‑1 (MQ=255) aaCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttt < 1:7090323/68‑1 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:22909408/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:5607035/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:33218592/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:28065423/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:5096884/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:27301550/1‑68 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:32099038/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTa > 1:18789557/1‑68 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGAAGTTGCCAGAGATCGACAtttttt > 1:33341453/1‑67 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:32903635/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:24469174/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:16818957/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg > 1:31512579/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:33854400/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:13175912/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:8476220/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:9291623/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:17715538/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:28415205/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:22185695/1‑68 (MQ=255) ccattTGAATTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt < 1:3866303/68‑1 (MQ=255) ttgatttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtttttt > 1:19417906/1‑68 (MQ=255) ttgatttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtttttt > 1:23695346/1‑68 (MQ=255) tgatttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGTTCGACATTTTTTACTGGTTTTTTg < 1:59221/68‑1 (MQ=255) tttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTg > 1:19688789/1‑65 (MQ=255) tttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTg > 1:14513453/1‑65 (MQ=255) tttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTg > 1:12102659/1‑65 (MQ=255) tgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGc < 1:6649187/68‑1 (MQ=255) tgctgcCCCAATGCAGCATCAAGACGTTGCCAGAGCTCGACATTTTTTACTGGTTTTTTGTCTGCGGt > 1:22542278/1‑68 (MQ=255) tgctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGt > 1:27837956/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:33514806/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt < 1:18610911/68‑1 (MQ=255) ccccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTcc > 1:8796721/1‑68 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa > 1:25341194/1‑68 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa > 1:17276483/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:21176151/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:23480520/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:21043069/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:7797710/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:20739541/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:26730419/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:8244866/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:14074252/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:9009258/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:10011002/1‑68 (MQ=255) | AGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAC > CP009273/232093‑232227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |