| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 725766 = | NA (NA) | 3 (0.010) | 3/104 | NT | NA | coding (728/4194 nt) | rhsC | Rhs family putative polymorphic toxin |
| ? | CP009273 | 725788 = | NA (NA) | coding (750/4194 nt) | rhsC | Rhs family putative polymorphic toxin | |||||
Only 100 of 332 total aligned reads displayed.
ACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCA > CP009273/725699‑725823 | aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:20133267/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:3561018/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:18917165/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:29776773/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:16515313/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:29828097/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:14893386/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:21886026/1‑68 (MQ=35)aCGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:11463924/1‑68 (MQ=35) cGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:3312186/1‑67 (MQ=35) cGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCg > 1:22475493/1‑67 (MQ=35) gTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTc > 1:30514585/1‑68 (MQ=35) gTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTc > 1:19739519/1‑68 (MQ=35) tCCCCCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGGCAc < 1:33681835/68‑1 (MQ=255) tCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTc > 1:6573650/1‑66 (MQ=35) tCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTc > 1:7918083/1‑66 (MQ=35) ccACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt < 1:3833539/68‑1 (MQ=35) cacaGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt > 1:12299277/1‑67 (MQ=25) cACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt > 1:13520153/1‑67 (MQ=35) cACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt > 1:15906643/1‑67 (MQ=35) cACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt > 1:26889315/1‑67 (MQ=35) cACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt > 1:34487322/1‑67 (MQ=35) cACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACt > 1:24938709/1‑67 (MQ=35) cACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCATCACt > 1:15391966/1‑67 (MQ=25) aCCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACtt > 1:10519041/1‑67 (MQ=35) aCCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACtt > 1:25973938/1‑67 (MQ=35) aCCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTc < 1:29536874/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:1258917/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:8244332/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:25523299/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:31117226/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:23518442/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:29921383/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:23126504/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:11554633/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:116000/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:18653108/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:33241393/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:29437271/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:34095680/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:13834905/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:6379126/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:19440926/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:19219079/68‑1 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCg > 1:21730636/1‑67 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCg > 1:22179189/1‑67 (MQ=35) gcgAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGGGACGGATGGTGCCGGGCGTCACTTCCgg < 1:19164043/68‑1 (MQ=25) gcgAAGCCGCCGGGGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCgg < 1:32482891/68‑1 (MQ=25) aGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTgg < 1:13072299/68‑1 (MQ=35) aGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTgg < 1:23272424/68‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:19583274/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:30874689/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:23438298/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:17453751/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:5487334/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:16154453/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt < 1:14554568/66‑1 (MQ=35) cgccgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGGGCCGGGCGTCACTTCCGGCTGGt < 1:12739715/66‑1 (MQ=25) cgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGa < 1:25361351/68‑1 (MQ=35) cgGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGa < 1:29131563/68‑1 (MQ=35) aTTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACg < 1:22704266/67‑1 (MQ=35) aTTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACg < 1:14186125/67‑1 (MQ=35) aTTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACg < 1:7138463/67‑1 (MQ=35) aTTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGc > 1:28950728/1‑68 (MQ=35) aTTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGc > 1:23879479/1‑68 (MQ=35) ttCAGCGGCGAAATCCCCGGCGTGACGGATGGTGCCGGGCGTCACTGCCGGCTGGGACTGACCACGCa < 1:3991236/68‑1 (MQ=11) tCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGCCCCCGCAg > 1:5751450/1‑68 (MQ=255) cAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAgg < 1:20533313/68‑1 (MQ=35) cAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAgg < 1:7045557/68‑1 (MQ=35) cAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAgg < 1:21527203/68‑1 (MQ=35) gcggcgAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGgc > 1:26194396/1‑67 (MQ=35) gcggcgAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGgc > 1:33864862/1‑67 (MQ=35) gcggcgAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGgc > 1:17794213/1‑67 (MQ=35) ggcgAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGgcgc < 1:5039802/67‑1 (MQ=35) ggcgAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCa > 1:25631965/1‑68 (MQ=35) ggcgAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCa < 1:20719905/68‑1 (MQ=35) gAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGc < 1:11115150/67‑1 (MQ=35) aaTCCCCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCggg < 1:2769531/68‑1 (MQ=25) aaTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCggg < 1:1691180/68‑1 (MQ=35) aaTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCgg < 1:24032163/67‑1 (MQ=35) aaTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCgg < 1:10742516/67‑1 (MQ=35) tCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCa > 1:31505707/1‑68 (MQ=35) aCCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCaga < 1:15725604/68‑1 (MQ=35) ccGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCagaa > 1:29578574/1‑68 (MQ=35) ggCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCCCGCAGGCGCAGCGGGCagaaga > 1:6185805/1‑68 (MQ=255) ggCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCagaaga > 1:8700656/1‑68 (MQ=35) ggCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCagaaga > 1:21299041/1‑68 (MQ=35) ggCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCagaaga > 1:32953445/1‑68 (MQ=35) cgggACGGATGGGGCCGGGCGGCACTTCCGGCGGGTACTGCCCACGCAGGCGCAGCGGGCAgaagaa < 1:28467158/64‑1 (MQ=11) cGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAgaagaa < 1:17244404/67‑1 (MQ=35) gggACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACAGACCACGCAGGCGCAGCGGGCAGAAGAAGc < 1:28186791/66‑1 (MQ=255) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc < 1:25744295/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc < 1:7399517/68‑1 (MQ=35) cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCG > 1:4271084‑M1/1‑67 (MQ=255) cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCG < 1:30657571‑M1/67‑1 (MQ=255) ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGC > 1:31740587‑M1/1‑68 (MQ=255) ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGC < 1:24463109‑M1/68‑1 (MQ=255) tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAcc < 1:32631678‑M1/68‑3 (MQ=255) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:10059823/1‑68 (MQ=35) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:28052381/1‑68 (MQ=35) | ACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCA > CP009273/725699‑725823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |