| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 234 (0.560) | 17 (0.050) | 5/90 | NT | 6.9% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 268 (0.800) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 671 total aligned reads displayed.
ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 | acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC > 1:12594507‑M1/1‑68 (MQ=255)acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC > 1:33630607‑M1/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:682403/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:17394326/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:31833857/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:7206931/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:11822104/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:33213347/1‑68 (MQ=255) cTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGtt < 1:21293771/68‑1 (MQ=255) gCTTATACGTGTAGCCTGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:18979479/68‑1 (MQ=255) cTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:13965619/1‑68 (MQ=255) ttATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:6355788/1‑67 (MQ=255) tataCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCcac < 1:17773283/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:364400/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:6154745/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:21146695/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:31336392/1‑68 (MQ=255) cGTGTGGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:16107528‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:20636850‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:20858079‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:4600108‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:22313‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:25602753‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:27767390‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:32815749‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:29311080‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:30585336‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:8584014‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:12169009‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:10546561‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATg < 1:7954085‑M2/67‑2 (MQ=255) tgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:24931544‑M2/67‑4 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:24510670‑M2/68‑9 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:19851921‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:13259069‑M2/1‑58 (MQ=255) cTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTg < 1:24702281/68‑1 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:27206053/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:28925221/1‑68 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:32454955‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:9176782/1‑67 (MQ=255) gCTGTCACGATCGGATGAAGAAAGCCATTGCTGCGTTCCCACATGAAGCAATGGCGGCACTTAAGGaa > 1:825179/1‑68 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:16542032/1‑66 (MQ=255) tGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAAct < 1:1514507/68‑1 (MQ=255) gTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAActt < 1:10941803/68‑1 (MQ=255) aCGATCGGATGACGAAACCCATTGCTGCGTTCCCACATgcaccaatggctttcgtcatccgatcgtg > 1:33742458‑M2/1‑38 (MQ=255) tCGGATGACGAAAGCCATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagc > 1:4130729‑M1/1‑24 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:25803185/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCGGCGTTCCCACATcccgcaatggctttcgtcatccgatcgtgacagc > 1:13667258‑M2/1‑34 (MQ=255) cGAACGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:33837433/67‑1 (MQ=255) gAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGACCTTCTTGGGCAAAaagaa > 1:1008579/1‑67 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:7752161/1‑68 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAATGAAgaga > 1:19120881/1‑67 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAgaga > 1:6714943/1‑67 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAgaga > 1:3932623/1‑67 (MQ=255) gCCATTGCTGAGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAgaga > 1:30197071/1‑67 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:33379031/1‑68 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:31580981/1‑68 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:23191920‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:26759407‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg < 1:25232973‑M1/67‑59 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:9717448‑M1/1‑9 (MQ=255) cATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACa < 1:4997991/68‑1 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:8508073‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:26582924‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:16848941‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:22026971‑M1/68‑61 (MQ=255) ttGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggct > 1:12939136‑M1/1‑7 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGGGGCACTGACGGAACTTCTTTGGCAAAAAGAAGAGAACAGt < 1:26042410/68‑1 (MQ=255) tgctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGtt < 1:18557358/68‑1 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:14605340‑M1/1‑5 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:28256669/1‑68 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:15490704/1‑68 (MQ=255) ctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:6061703‑M1/1‑4 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:31000145‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:8906425‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:21677676‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:4469381‑M1/1‑3 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGCGAACAGTTGgc < 1:23291348/68‑1 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:32095751/1‑68 (MQ=255) gcatgtggtaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:7361259‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcttttagtttgcccggctacacg < 1:1832570‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:15941713‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:14371338‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:13438147‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:7576482‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:11362804‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:16436228‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:10353450‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:16732757‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:20106237‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:5297255‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:20285436‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:22584598‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:23772848‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:34513144‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:34300239‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:29208289‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:29921897‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:32943181‑M1/68‑67 (MQ=255) catgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacgt > 1:24178440‑M1/1‑1 (MQ=255) | ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |