| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 234 (0.560) | 17 (0.050) | 5/90 | NT | 6.9% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 268 (0.800) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 534 total aligned reads displayed.
TACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAA > CP009273/2191196‑2191330 | taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:10276938/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:5178683/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:31934404/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:31336392/1‑68 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:10546561‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7576482‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17905828‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:20636850‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:23486189‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:12660911‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:3576009‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:3369285‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:13769470‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:3323875‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:29311080‑M2/68‑3 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:1904439‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:31000145‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:4469381‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:5441692‑M2/1‑65 (MQ=255) gtgtAGCCGAGCAAAGTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:18421610‑M2/1‑65 (MQ=255) tgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:1236693‑M2/67‑4 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:14605340‑M2/1‑63 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc < 1:23237530‑M2/68‑6 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:24510670‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:21379452‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:26582924‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:16848941‑M2/68‑9 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:16095777‑M2/68‑10 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:7403229‑M2/67‑10 (MQ=255) gCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcg > 1:9361531/1‑67 (MQ=255) aaaCGCTGTCACGATCGGATGACGAAGGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGAc < 1:30250607/68‑1 (MQ=255) aaaCGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGAc < 1:22415396/68‑1 (MQ=255) aaCGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACg < 1:30028031/68‑1 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:11210215/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:20290578/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:8119761/1‑68 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:20868514‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:3905682‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:24285777/1‑67 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:2700601/1‑67 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:7161830/1‑66 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:25729850/1‑66 (MQ=255) tGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAAct < 1:20114985/68‑1 (MQ=255) tGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAAct < 1:25066056/68‑1 (MQ=255) gTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAActt < 1:21148772/68‑1 (MQ=255) gATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTgg > 1:6156013/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCGACATGCAGCAATGGCGGCACTGAGGGAACTTCTTGGGc > 1:16240297/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:15350049/67‑1 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:13082728/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:3343771/1‑68 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa < 1:31608087/68‑1 (MQ=255) aTGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaaaa > 1:27978463/1‑68 (MQ=255) cGAACGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:33837433/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCATAaaga < 1:2905479/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:14196774/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:27654275/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:11981456/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:4893836/67‑1 (MQ=255) gAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaag < 1:34071987/68‑1 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:22132008/1‑68 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAgaga > 1:6714943/1‑67 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:23867882/1‑68 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACGGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:34427528/1‑68 (MQ=255) cATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGaa < 1:2170331/66‑1 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt > 1:1883094/1‑68 (MQ=255) tgctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGtt < 1:16536928/68‑1 (MQ=255) tgctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGtt < 1:26027134/68‑1 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:28256669/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:13426404/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:412771/1‑68 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGTAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:4681485/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:19608715/67‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAtt < 1:26850799/68‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAtt < 1:8388509/68‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAtt > 1:24750554/1‑68 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:11504949/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:7771280/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:956678/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:32977513/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:32689472/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:19869457/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:30550123/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:10023896/68‑1 (MQ=255) cacaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATg < 1:15751244/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACTGAACTTCTTGGGCAATAAGAAGAGAACAGTTGGCGCATTATGc < 1:17221142/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:32926818/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:19404194/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:891845/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:8644744/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:8523509/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:6355043/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:15105859/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:32129722/68‑1 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCt > 1:25502066/1‑68 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCt > 1:23027247/1‑68 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCt > 1:5684665/1‑68 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCt > 1:32299557/1‑68 (MQ=255) aTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAGGAAGAGAACAGTTGGCGCATTATGCtg > 1:16712925/1‑67 (MQ=255) aTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTa > 1:28894269/1‑68 (MQ=255) tGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTaa < 1:11394479/68‑1 (MQ=255) | TACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAA > CP009273/2191196‑2191330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |