| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 271 (0.650) | 17 (0.050) | 8/94 | NT | 6.8% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 239 (0.690) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 481 total aligned reads displayed.
AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435934‑2436067 | gggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:32253119‑M1/1‑67 (MQ=255) ggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCGCCCCTGCTCCGC > 1:16087031‑M1/1‑68 (MQ=255) ctggcgattgccggaagcacccagtgcgggggcctcatccgcgcattaaagcgttacctgccagCcgc < 1:172483‑M1/4‑1 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:23636106‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggccgcatccgcgcaataaagcgttacctgccagCcgcg > 1:195175‑M1/64‑68 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:15767317‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:10032736‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:19783611‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCACCGC > 1:4809243‑M1/1‑67 (MQ=255) ggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataacgcgttacctgccagCcgcg < 1:29085775‑M1/5‑1 (MQ=255) tttGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC > 1:10141629‑M1/1‑68 (MQ=255) tttGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:12646844‑M1/68‑1 (MQ=255) gcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc < 1:29580156‑M1/7‑1 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:6413297‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:4358423‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:2142688‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:25602993‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:6788656‑M1/61‑67 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:1306603‑M1/9‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:13873787‑M1/60‑68 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:6925262/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:7339011/68‑1 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:23913567/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:9525359/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:10950887/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:8571166/1‑68 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:400422/67‑1 (MQ=255) aaaCGGGAAATGCTTTGCGGGGGGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTaa < 1:16763625/68‑1 (MQ=255) cGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAAcc > 1:24900052/1‑67 (MQ=255) cagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGTGGTTTAACCGCACggg > 1:16382883‑M1/44‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:28794326/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:20159002/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:1418550/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:33683549/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTACCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:3749994/1‑68 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:17955748/1‑68 (MQ=255) ttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAAc < 1:25304940/55‑1 (MQ=255) gCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagcagc < 1:28540234/68‑1 (MQ=255) cGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagcagca > 1:22484328/1‑68 (MQ=255) ggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:13698326/42‑1 (MQ=255) tccgcgcaataaagcgttacctgccagCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGaa < 1:14619369‑M1/41‑1 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:5812616/1‑68 (MQ=255) aCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:1227876/1‑67 (MQ=255) aCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACCGGCAGCAGCAAACGGCAAgcg > 1:30231027/1‑67 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGa < 1:31864985/66‑1 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:8441506/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:18721498/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAt < 1:30811900/67‑1 (MQ=255) tACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATc > 1:1136146/1‑68 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:24952516/1‑68 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:17405026/1‑68 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:11125660/1‑68 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:7916698/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:10418347/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:28343366/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:6136934/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:18338372/1‑67 (MQ=255) gttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCACACGGGAGGCGGCGATGAGcggc < 1:25974741‑M1/56‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc > 1:19009352/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTaatagcgccagcgacaacaccgcgctggcaataccaccgccgataatc > 1:7188008‑M1/1‑20 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:9267418/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:22590440/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:33189542/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:31405287/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaatacccccgccgataatcg > 1:25060771‑M1/1‑18 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCGGCAGCAAACGGGATGCGGCGATTATCGGCggt > 1:7637138/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:9717511/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:3399190/1‑68 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:30008718/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:31089912/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:26380704/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:17662944/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:11652569/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:34455081/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:11896778/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGGTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:20273197/68‑1 (MQ=255) ccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtggt > 1:23521442/1‑68 (MQ=255) ccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAt < 1:27991983‑M1/64‑1 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:24128862/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:8046946/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:2669314/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGGGGTAtt < 1:2762137/68‑1 (MQ=255) tCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatcgccgcttccc > 1:10794267‑M1/1‑10 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGACGCGGCGATTATCGGCGGTGGTATTg > 1:29769332/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:2326794/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:22047507/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:26173969/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:9114873/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:20868835/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:32670350/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:24333258/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:33427856/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:28094574/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:21643623/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:20540122/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:22897662/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:5236938/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg < 1:12743693/67‑1 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGc < 1:30432630/68‑1 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGACGATTATCGGCGGTGGTATTg > 1:14897241/1‑67 (MQ=255) | AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435934‑2436067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |